Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: protein import into chloroplast thylakoid membrane

Term: GO:0045038  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene1200 SustainPine v2.0 2061
• AutoFact: signal recognition particle subunit [Arabidopsis thaliana] sp|P37107.1|SR54C_ARATH RecName: Full=Signal recognition particle 54 kDa protein, chloroplastic; Short=54 chloroplast protein; Short=54CP; Short=SRP54; AltName: Full=FFC; Flags: Precursor emb|CAA7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: signal recognition particle 54 kda chloroplastic-like 0.0
Complete
sp_v2.0_unigene2316 SustainPine v2.0 1614
• AutoFact: Ankyrin repeat domain protein, putative n=1 Tax=Ricinus communis RepID=B9RF69_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ankyrin repeat domain 0.0
C-terminus
sp_v2.0_unigene2921 SustainPine v2.0 1602
• AutoFact: chloroplast Hcf106-1 [Physcomitrella patens] 9.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene3746 SustainPine v2.0 1067
• AutoFact: ThylakoidFormat domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chloroplast-localized ptr -binding protein1 0.0
N-terminus
sp_v2.0_unigene5292 SustainPine v2.0 1234
• AutoFact: Inner membrane protein PPF-1, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SZE3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: inner membrane protein 0.0
N-terminus
sp_v2.0_unigene5705 SustainPine v2.0 276
• AutoFact: Os01g0958100 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=Q0JFW3_ORYSJ 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: fused signal recognition particle receptor 2.54994e-41
N-terminus
sp_v2.0_unigene17420 SustainPine v2.0 1180
• AutoFact: Inner membrane protein PPF-1, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SZE3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: inner membrane protein 0.0
N-terminus
sp_v2.0_unigene20990 SustainPine v2.0 1160
• AutoFact: Inner membrane protein ALBINO3, chloroplastic n=4 Tax=Arabidopsis RepID=ALB3_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: inner membrane protein albino3 0.0
Putative N-terminus
sp_v2.0_unigene29309 SustainPine v2.0 539
• AutoFact: chloroplast srp54 receptor1 [Zea mays] emb|CAD70570.1| chloroplast SRP receptor cpFtsY precursor [Zea mays] gb|ACR34281.1| unknown [Zea mays] 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
• Blast2go: signal recognition 54 kda protein 3.93765e-43
Putative Complete
sp_v2.0_unigene69386 SustainPine v2.0 394
• AutoFact: chloroplast srp54 receptor1 [Zea mays] emb|CAD70570.1| chloroplast SRP receptor cpFtsY precursor [Zea mays] gb|ACR34281.1| unknown [Zea mays] 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain