|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v2.0_unigene1200
|
SustainPine v2.0
|
2061
|
|
• AutoFact: signal recognition particle subunit [Arabidopsis thaliana] sp|P37107.1|SR54C_ARATH RecName: Full=Signal recognition particle 54 kDa protein, chloroplastic; Short=54 chloroplast protein; Short=54CP; Short=SRP54; AltName: Full=FFC; Flags: Precursor emb|CAA7
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: signal recognition particle 54 kda chloroplastic-like
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene1829
|
SustainPine v2.0
|
2181
|
|
• AutoFact: Signal recognition particle 54 kDa protein 2 n=11 Tax=Magnoliophyta RepID=SR542_SOLLC
|
0.0
|
|
• FL-Next: sp=Signal recognition particle 54 kDa protein 2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
|
0.0
|
|
• Blast2go: signal recognition particle 54 kda protein 3
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene1853
|
SustainPine v2.0
|
1525
|
|
• AutoFact: mRNA-decapping enzyme subunit 2 [Arabidopsis thaliana] dbj|BAC43684.1| unknown protein [Arabidopsis thaliana] gb|AAO63396.1| At5g13570 [Arabidopsis thaliana] gb|AED91912.1| mRNA-decapping enzyme subunit 2 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene2158
|
SustainPine v2.0
|
1673
|
|
• AutoFact: mRNA-binding protein precursor [Nicotiana tabacum]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: mrna binding protein precursor-like
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene2604
|
SustainPine v2.0
|
2325
|
|
• AutoFact: cleavage stimulation factor 77 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: plant rna cleavage stimulation
|
0.0
|
|
C-terminus
|
|
sp_v2.0_unigene2789
|
SustainPine v2.0
|
1242
|
|
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain)
|
3.0e-07
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
C-terminus
|
|
sp_v2.0_unigene3473
|
SustainPine v2.0
|
1405
|
|
• AutoFact: HIV Tat-specific factor 1 [Arabidopsis thaliana] emb|CAC01867.1| putative protein [Arabidopsis thaliana] gb|AAY25436.1| At5g16260 [Arabidopsis thaliana] dbj|BAF01062.1| hypothetical protein [Arabidopsis thaliana] gb|AED92266.1| HIV Tat-specific factor 1 [
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: hiv tat-specific factor 1 homolog
|
0.0
|
|
N-terminus
|
|
sp_v2.0_unigene15416
|
SustainPine v2.0
|
1282
|
|
• AutoFact: Putative glycine-rich protein n=1 Tax=Picea glauca RepID=Q3HRT2_PICGL
|
2.0e-40
|
|
• FL-Next: tr=Putative glycine-rich protein; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene17884
|
SustainPine v2.0
|
1184
|
|
• AutoFact: mRNA decapping enzyme 2; K12613 mRNA-decapping enzyme subunit 2 [EC:3.-.-.-]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
C-terminus
|
|
sp_v2.0_unigene26062
|
SustainPine v2.0
|
1035
|
|
• AutoFact: Os01g0844800 protein n=3 Tax=Oryza sativa RepID=Q0JHT2_ORYSJ
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: pumilio homolog 1-like
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene36392
|
SustainPine v2.0
|
1246
|
|
• AutoFact: cleavage stimulating factor 64 [Arabidopsis thaliana] gb|AAF43233.1|AC012654_17 Contains similarity to the polyadenylation factor 64 kDa subunit from Xenopus laevis gb|U17394; It contains RNA recognition motif PF|00076. ESTs gb|AI993960 and T42211 come fr
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: mrna splicing
|
0.0
|
|
N-terminus
|
|
sp_v2.0_unigene37053
|
SustainPine v2.0
|
417
|
|
• AutoFact: Plant RNA cleavage stimulation factor, putative n=1 Tax=Ricinus communis RepID=B9S078_RICCO
|
7.0e-28
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: cleavage stimulation factor subunit 3
|
0.0
|
|
N-terminus
|
|
sp_v2.0_unigene38408
|
SustainPine v2.0
|
528
|
|
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SGR5_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like
|
0.0
|
|
Putative C-terminus
|
|
sp_v2.0_unigene50688
|
SustainPine v2.0
|
237
|
|
• AutoFact: Calreticulin n=1 Tax=Polysphondylium pallidum RepID=D3BIF1_POLPA
|
1.0e-28
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: calreticulin precursor
|
3.30653e-35
|
|
Internal
|
|
sp_v2.0_unigene54799
|
SustainPine v2.0
|
480
|
|
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SF38.1|PP222_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09650, chloroplastic; AltName: Full=Protein HIGH CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor gb|AAF
|
2.0e-12
|
|
• FL-Next: sp=Pentatricopeptide repeat-containing protein At3g09650, chloroplastic; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like
|
3.20413e-14
|
|
N-terminus
|
|
sp_v2.0_unigene57422
|
SustainPine v2.0
|
440
|
|
• AutoFact: Vacuolar transporter chaperone 1 n=2 Tax=Agaricales RepID=A8NYM3_COPC7
|
6.0e-39
|
|
• FL-Next: tr=Putative uncharacterized protein; Aureococcus anophagefferens.
|
0.0
|
|
• Blast2go: vtc1p
|
0.0
|
|
Putative Complete
|
|
sp_v2.0_unigene58063
|
SustainPine v2.0
|
417
|
|
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SF38.1|PP222_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09650, chloroplastic; AltName: Full=Protein HIGH CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor gb|AAF
|
4.0e-30
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like
|
2.8333e-36
|
|
Internal
|
|
sp_v2.0_unigene59088
|
SustainPine v2.0
|
178
|
|
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SF38.1|PP222_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09650, chloroplastic; AltName: Full=Protein HIGH CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor gb|AAF
|
6.0e-12
|
|
• FL-Next: sp=Pentatricopeptide repeat-containing protein At3g09650, chloroplastic; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like
|
6.67045e-17
|
|
Internal
|
|
sp_v2.0_unigene63241
|
SustainPine v2.0
|
440
|
|
• AutoFact: Plant RNA cleavage stimulation factor, putative n=1 Tax=Ricinus communis RepID=B9S078_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize).
|
0.0
|
|
• Blast2go: mrna 3 -end-processing protein rna14
|
0.0
|
|
Putative N-terminus
|
|
sp_v2.0_unigene67257
|
SustainPine v2.0
|
348
|
|
• AutoFact: 40S ribosomal protein S5 [Capsicum annuum]
|
6.0e-15
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 40s ribosomal protein s5
|
7.80771e-20
|
|
C-terminus
|
