Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nucleoid

Term: GO:0009295  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene56321 SustainPine v2.0 196
AutoFact: MurE synthetase n=1 Tax=Physcomitrella patens subsp. patens RepID=Q3LHI5_PHYPA 3.0e-25
FL-Next: tr=MurE synthetase; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: udp-n-acetylmuramoyl-l-alanyl-d-glutamate-- -diaminopimelate ligase-like 2.74769e-30
Internal
sp_v2.0_unigene68160 SustainPine v2.0 504
AutoFact: 50S ribosomal protein L12, chloroplastic n=3 Tax=Nicotiana RepID=RK12_NICSY 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l12-a 2.26253e-22
C-terminus
sp_v2.0_unigene68198 SustainPine v2.0 310
AutoFact: 50S ribosomal protein L29, chloroplastic precursor [Zea mays] sp|Q9SWI6.1|RK29_MAIZE RecName: Full=50S ribosomal protein L29, chloroplastic; AltName: Full=CL29; Flags: Precursor gb|AAD50383.1|AF147725_1 ribosomal protein L29 [Zea mays] gb|ACF88436.1| unkn 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l29 8.23444e-28
Internal
sp_v2.0_unigene70665 SustainPine v2.0 349
AutoFact: 50S ribosomal protein L29 [Arabidopsis thaliana] sp|Q9FJP3.1|RK29_ARATH RecName: Full=50S ribosomal protein L29, chloroplastic; AltName: Full=CL29; Flags: Precursor pdb|3BBO|Z Chain Z, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l29 9.94658e-22
Putative C-terminus
sp_v2.0_unigene75411 SustainPine v2.0 344
AutoFact: PREDICTED: similar to DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Vitis vinifera RepID=UPI0001985B62 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna gyrase subunit a 6.28432e-35
C-terminus
sp_v2.0_unigene85937 SustainPine v2.0 329
AutoFact: DNA gyrase subunit A, chloroplast/mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9SK06_RICCO 7.0e-28
FL-Next: sp=DNA gyrase subunit A, chloroplastic/mitochondrial; Nicotiana benthamiana. 0.0
Blast2go: dna gyrase subunit a 1.91432e-35
Internal
sp_v2.0_unigene86338 SustainPine v2.0 258
AutoFact: Elongation factor Tu n=3 Tax=Spermatophyta RepID=A9NWL9_PICSI 2.0e-23
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor chloroplastic-like 3.02793e-23
Internal
sp_v2.0_unigene91511 SustainPine v2.0 710
AutoFact: 50S ribosomal protein L12, chloroplastic n=2 Tax=Spinacia oleracea RepID=RK12_SPIOL 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l12-a 2.99723e-30
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain