Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: DNA-directed RNA polymerase II, core complex

Term: GO:0005665  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene7811 SustainPine v2.0 982
AutoFact: RNA polymerase n=1 Tax=Elaeis guineensis RepID=B3TLS5_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 0.0
Complete
sp_v2.0_unigene7837 SustainPine v2.0 1392
AutoFact: DNA-directed RNA polymerase II subunit E [Arabidopsis thaliana] gb|AAK48978.1|AF370551_1 RNA polymerase I, II and III 24.3 kDa subunit [Arabidopsis thaliana] gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5 [Arabidopsis thaliana] gb|AAC28253.1| RNA polymerase I 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii subunit rpabc1 0.0
Complete
sp_v2.0_unigene9429 SustainPine v2.0 1673
AutoFact: RNA polymerase, dimerisation [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase third largest subunit 0.0
Complete
sp_v2.0_unigene11779 SustainPine v2.0 682
AutoFact: DNA-directed RNA polymerase n=6 Tax=core eudicotyledons RepID=B9SXC0_RICCO 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna polymerase ii subunit rpb1-like 0.0
N-terminus
sp_v2.0_unigene11828 SustainPine v2.0 1653
AutoFact: DNA-directed RNA polymerase (Fragment) n=10 Tax=Spermatophyta RepID=Q2TUN6_GINBI 0.0
FL-Next: sp=DNA-directed RNA polymerase; Pinus koraiensis (Korean pine). Plastid; Chloroplast. 0.0
Blast2go: rna polymerase ii largest subunit 0.0
Putative C-terminus
sp_v2.0_unigene13921 SustainPine v2.0 1787
AutoFact: RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gb|AAA34005.1| RNA polymerase II [Glycine max] gb|ACU13766.1| unknown [Glycine max] 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: dna-directed rna polymerase ii subunit rpb7 0.0
Complete
sp_v2.0_unigene15323 SustainPine v2.0 1186
AutoFact: DNA-directed RNA polymerase II subunit E [Arabidopsis thaliana] gb|AAK48978.1|AF370551_1 RNA polymerase I, II and III 24.3 kDa subunit [Arabidopsis thaliana] gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5 [Arabidopsis thaliana] gb|AAC28253.1| RNA polymerase I 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene15875 SustainPine v2.0 739
AutoFact: DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative [Musa balbisiana] 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 4.62428e-44
Complete
sp_v2.0_unigene16111 SustainPine v2.0 740
AutoFact: DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative [Musa balbisiana] 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 4.62428e-44
Complete
sp_v2.0_unigene17063 SustainPine v2.0 971
AutoFact: DNA-directed RNA polymerase II subunit J n=4 Tax=Poaceae RepID=B4FJS1_MAIZE 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene18591 SustainPine v2.0 800
AutoFact: DNA-directed RNA polymerase II subunit E [Arabidopsis thaliana] gb|AAK48978.1|AF370551_1 RNA polymerase I, II and III 24.3 kDa subunit [Arabidopsis thaliana] gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5 [Arabidopsis thaliana] gb|AAC28253.1| RNA polymerase I 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase ii and iii kda subunit 1.71185e-36
Putative Complete
sp_v2.0_unigene20839 SustainPine v2.0 748
AutoFact: DNA-directed RNA Polymerase II subunit K [Arabidopsis thaliana] dbj|BAB09703.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76628.1| unknown protein [Arabidopsis thaliana] gb|AAL85038.1| unknown protein [Arabidopsis thaliana] gb|AAM67289.1| DNA d 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 3.03202e-30
Complete
sp_v2.0_unigene21433 SustainPine v2.0 1249
AutoFact: DNA-directed RNA polymerase, 14 to 18 kDa subunit [Medicago truncatula] 5.04467e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase rpb6 0.0
Complete
sp_v2.0_unigene21438 SustainPine v2.0 1225
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 0.0
Complete
sp_v2.0_unigene21510 SustainPine v2.0 895
AutoFact: RNA polymerase n=1 Tax=Elaeis guineensis RepID=B3TLS5_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 0.0
Complete
sp_v2.0_unigene21755 SustainPine v2.0 788
AutoFact: DNA-directed RNA Polymerase II subunit K [Arabidopsis thaliana] dbj|BAB09703.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76628.1| unknown protein [Arabidopsis thaliana] gb|AAL85038.1| unknown protein [Arabidopsis thaliana] gb|AAM67289.1| DNA d 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 2.78956e-31
Complete
sp_v2.0_unigene21891 SustainPine v2.0 425
AutoFact: DNA-directed RNA polymerase II, subunit n, putative n=2 Tax=Tracheophyta RepID=B9T3C0_RICCO 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase ii subunit l 7.30978e-15
Putative Complete
sp_v2.0_unigene22087 SustainPine v2.0 1659
AutoFact: DNA-directed RNA polymerase n=3 Tax=Magnoliophyta RepID=B9FZ51_ORYSJ 3.9937e-43
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna polymerase 0.0
C-terminus
sp_v2.0_unigene23338 SustainPine v2.0 1013
AutoFact: 15.9 kDa subunit of RNA polymerase II n=8 Tax=core eudicotyledons RepID=O48890_ARATH 0.0
FL-Next: tr=RPB15.9; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: kda subunit of rna polymerase ii 0.0
Complete
sp_v2.0_unigene23357 SustainPine v2.0 968
AutoFact: DNA-directed RNA polymerase IIa [Nicotiana tabacum] gb|AAD34614.1|AF153278_1 DNA-directed RNA polymerase IIb [Nicotiana tabacum] 4.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii subunit rpabc2 0.0
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain