Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: chloroplast thylakoid

Term: GO:0009534  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene544 SustainPine v2.0 858
AutoFact: Peroxiredoxin Q, chloroplastic n=4 Tax=Populus RepID=PRXQ_POPJC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxiredoxin q 0.0
Complete
sp_v2.0_unigene2890 SustainPine v2.0 1593
AutoFact: CDSP32 protein (Chloroplast Drought-induced Stress Protein of 32kDa) [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thioredoxin-like protein cdsp32 0.0
Complete
sp_v2.0_unigene5561 SustainPine v2.0 616
AutoFact: Thioredoxin-like 8 n=3 Tax=Zea mays RepID=B6TCX1_MAIZE 8.99634e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene5705 SustainPine v2.0 276
AutoFact: Os01g0958100 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=Q0JFW3_ORYSJ 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fused signal recognition particle receptor 2.54994e-41
N-terminus
sp_v2.0_unigene5845 SustainPine v2.0 1351
AutoFact: Thioredoxin F2, chloroplastic n=2 Tax=Arabidopsis RepID=TRXF2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thioredoxin f2 0.0
Complete
sp_v2.0_unigene6403 SustainPine v2.0 1102
AutoFact: Thioredoxin X, chloroplastic n=3 Tax=Oryza sativa RepID=TRXX_ORYSJ 7.00649e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thioredoxin x 0.0
Complete
sp_v2.0_unigene6466 SustainPine v2.0 1551
AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=D5A7Z0_PICSI 0.0
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent clp protease proteolytic subunit 0.0
Complete
sp_v2.0_unigene11738 SustainPine v2.0 895
AutoFact: Chloroplast biogenesis protein n=1 Tax=Lotus japonicus RepID=Q8GZD1_LOTJA 0.0
FL-Next: sp=Cytochrome c-type biogenesis ccda-like chloroplastic protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cytochrome c biogenesis protein precursor 0.0
C-terminus
sp_v2.0_unigene12142 SustainPine v2.0 274
AutoFact: thioredoxin-like 5 [Oryza sativa Indica Group] 2.0e-18
FL-Next: sp=Thioredoxin-like 3-1, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: thioredoxin-like 5 6.86473e-24
C-terminus
sp_v2.0_unigene12252 SustainPine v2.0 1390
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SJG4_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family of the mitochondria family 0.0
Putative N-terminus
sp_v2.0_unigene12967 SustainPine v2.0 1533
AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9NTE8_PICSI 0.0
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent clp protease proteolytic subunit 0.0
Complete
sp_v2.0_unigene14698 SustainPine v2.0 566
AutoFact: Myosin vIII, putative n=1 Tax=Ricinus communis RepID=B9SCN9_RICCO 9.94922e-44
FL-Next: tr=Myosin vIII, putative; Ricinus communis (Castor bean). 0.0
Blast2go: myosin-like protein 2.63444e-43
Internal
sp_v2.0_unigene16882 SustainPine v2.0 1702
AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9NZU9_PICSI 0.0
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent clp protease proteolytic subunit 0.0
Complete
sp_v2.0_unigene16917 SustainPine v2.0 1640
AutoFact: ATP-dependent Clp protease proteolytic subunit n=2 Tax=Picea sitchensis RepID=A9NRW7_PICSI 0.0
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent clp protease proteolytic subunit 3 0.0
Complete
sp_v2.0_unigene18616 SustainPine v2.0 1144
AutoFact: Thioredoxin F2, chloroplastic n=2 Tax=Arabidopsis RepID=TRXF2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thioredoxin f2 0.0
Complete
sp_v2.0_unigene25768 SustainPine v2.0 314
AutoFact: Transporter ATM1, mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9T3V9_RICCO 7.00649e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family of the mitochondria family 0.0
Internal
sp_v2.0_unigene27477 SustainPine v2.0 1600
AutoFact: putative myosin [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: myosin-like protein 0.0
Internal
sp_v2.0_unigene34602 SustainPine v2.0 539
AutoFact: Thylakoidal processing peptidase 1, chloroplastic n=2 Tax=Arabidopsis RepID=TPP1_ARATH 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chloroplast thylakoidal processing peptidase 1.35168e-13
C-terminus
sp_v2.0_unigene37988 SustainPine v2.0 501
AutoFact: Unconventional myosin n=1 Tax=Helianthus annuus RepID=O24515_HELAN 1.0e-13
FL-Next: tr=Unconventional myosin; Helianthus annuus (Common sunflower). 0.0
Blast2go: myosin-like protein 6.95546e-15
Internal
sp_v2.0_unigene44826 SustainPine v2.0 490
AutoFact: myosin [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain