Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: regulation of seed germination

Term: GO:0010029  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene830 SustainPine v2.0 1880
AutoFact: PREDICTED: similar to cytokinin receptor 1 n=1 Tax=Vitis vinifera RepID=UPI00019828F5 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histidine kinase 0.0
Putative Complete
sp_v2.0_unigene1262 SustainPine v2.0 2008
AutoFact: Arginyl-tRNA--protein transferase 1 n=1 Tax=Ricinus communis RepID=B9SLM9_RICCO 0.0
FL-Next: sp=Arginyl-tRNA--protein transferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: arginyl-trna--protein transferase 1-like 0.0
C-terminus
sp_v2.0_unigene1947 SustainPine v2.0 1424
AutoFact: Outward-rectifying potassium channel KCO1 n=1 Tax=Eucalyptus camaldulensis RepID=Q9LLM5_EUCCA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: outward rectifying potassium channel 0.0
C-terminus
sp_v2.0_unigene3949 SustainPine v2.0 449
AutoFact: ubiquitin-protein ligase E3-alpha-like protein [Arabidopsis thaliana] 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 8.60706e-23
Internal
sp_v2.0_unigene5626 SustainPine v2.0 1798
AutoFact: PREDICTED: similar to cytokinin receptor 1 n=1 Tax=Vitis vinifera RepID=UPI00019828F5 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histidine kinase 0.0
Putative Complete
sp_v2.0_unigene8627 SustainPine v2.0 1189
AutoFact: zf-UBR domain containing protein 8.0e-29
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v2.0_unigene8749 SustainPine v2.0 762
AutoFact: thiamin pyrophosphokinase1 [Arabidopsis thaliana] gb|AAL25560.1| At1g02880/F22D16_33 [Arabidopsis thaliana] gb|AAM26660.1| At1g02880/F22D16_33 [Arabidopsis thaliana] gb|AEE27488.1| thiamin pyrophosphokinase1 [Arabidopsis thaliana] 4.99997e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thiamin pyrophosphokinase1 0.0
C-terminus
sp_v2.0_unigene9683 SustainPine v2.0 2255
AutoFact: pfam07576, BRAP2, BRCA1-associated protein 2 9.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: brca1-associated protein 0.0
Complete
sp_v2.0_unigene11623 SustainPine v2.0 928
AutoFact: thiamin pyrophosphokinase1 [Arabidopsis thaliana] gb|AAF02878.1|AC009525_12 Unknown protein [Arabidopsis thaliana] gb|AAM62805.1| thiamin pyrophosphokinase, putative [Arabidopsis thaliana] gb|AEE27489.1| thiamin pyrophosphokinase1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thiamin pyrophosphokinase 0.0
Complete
sp_v2.0_unigene13488 SustainPine v2.0 1413
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene20006 SustainPine v2.0 545
AutoFact: Thiamin pyrophosphokinase, putative n=1 Tax=Ricinus communis RepID=B9SAN6_RICCO 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thiamin pyrophosphokinase 7.48446e-21
N-terminus
sp_v2.0_unigene25563 SustainPine v2.0 949
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 2.0e-07
FL-Next: sp=Glycine-rich RNA-binding protein; Daucus carota (Carrot). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase e 0.0
Complete
sp_v2.0_unigene26792 SustainPine v2.0 772
AutoFact: Arginyl-tRNA--protein transferase 1 n=2 Tax=Andropogoneae RepID=C5YYU0_SORBI 5.04467e-44
FL-Next: sp=Arginyl-tRNA--protein transferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: arginyl-trna--protein transferase 1-like 0.0
C-terminus
sp_v2.0_unigene28625 SustainPine v2.0 1117
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 2.0e-07
FL-Next: sp=Glycine-rich RNA-binding protein; Daucus carota (Carrot). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase e 0.0
Complete
sp_v2.0_unigene34409 SustainPine v2.0 553
AutoFact: Arginyl-tRNA--protein transferase 1 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T4R5_VITVI 0.0
FL-Next: sp=Arginyl-tRNA--protein transferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: arginyl-trna--protein transferase 1-like 0.0
Internal
sp_v2.0_unigene42092 SustainPine v2.0 311
AutoFact: TPA: histidine kinase [Oryza sativa Japonica Group] 1.0e-22
FL-Next: sp=Histidine kinase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histidine kinase 3 1.77379e-29
Internal
sp_v2.0_unigene42539 SustainPine v2.0 511
AutoFact: Arginyl-tRNA--protein transferase 1 n=1 Tax=Ricinus communis RepID=B9SLM9_RICCO 3.0e-32
FL-Next: sp=Arginyl-tRNA--protein transferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: arginyl-trna--protein transferase 1-like 6.65812e-37
Internal
sp_v2.0_unigene46983 SustainPine v2.0 500
AutoFact: ubiquitin-protein ligase E3-alpha-like protein [Arabidopsis thaliana] 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 8.02821e-34
N-terminus
sp_v2.0_unigene47809 SustainPine v2.0 539
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 2.22628e-28
Internal
sp_v2.0_unigene66508 SustainPine v2.0 367
AutoFact: Histidine kinase 4 n=3 Tax=Arabidopsis RepID=AHK4_ARATH 2.0e-22
FL-Next: Isoform 2 of Histidine kinase 4 OS=Arabidopsis thaliana GN=AHK4 0.0
Blast2go: cre1 2.41102e-27
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain