Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: RNA-dependent DNA replication

Term: GO:0006278  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene282 SustainPine v2.0 2299
• AutoFact: pfam00665, rve, Integrase core domain 5.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
Complete
sp_v2.0_unigene3237 SustainPine v2.0 1673
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: phosphatidate phosphatase lpin3 1.23193e-20
C-terminus
sp_v2.0_unigene3579 SustainPine v2.0 1463
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
N-terminus
sp_v2.0_unigene3803 SustainPine v2.0 1160
• AutoFact: putative helicase [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-like helicase domain-containing protein 0.0
Putative C-terminus
sp_v2.0_unigene4176 SustainPine v2.0 1836
• AutoFact: Intron maturase, type II family protein [Arabidopsis thaliana] dbj|BAB10231.1| unnamed protein product [Arabidopsis thaliana] gb|AED95448.1| Intron maturase, type II family protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized mitochondrial protein ymf11-like 0.0
C-terminus
sp_v2.0_unigene4213 SustainPine v2.0 1136
• AutoFact: NUC130/3NT and SDA1 domain-containing protein [Arabidopsis thaliana] dbj|BAE98871.1| hypothetical protein [Arabidopsis thaliana] gb|AEE28977.1| NUC130/3NT and SDA1 domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=F3F19.18; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein sda1 homolog 0.0
N-terminus
sp_v2.0_unigene4974 SustainPine v2.0 1060
• AutoFact: Type II intron maturase family protein n=4 Tax=Andropogoneae RepID=B6SWF1_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized mitochondrial protein ymf11-like 0.0
Internal
sp_v2.0_unigene5159 SustainPine v2.0 1155
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_64.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7T395_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein pns1 0.0
C-terminus
sp_v2.0_unigene6871 SustainPine v2.0 1548
• AutoFact: Transmembrane protein TPARL, putative n=1 Tax=Ricinus communis RepID=B9RWP5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
Complete
sp_v2.0_unigene11442 SustainPine v2.0 730
• AutoFact: protein trichome birefringence-like 5 [Arabidopsis thaliana] gb|AED92864.1| protein trichome birefringence-like 5 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein trichome birefringence-like 5 0.0
Internal
sp_v2.0_unigene11482 SustainPine v2.0 607
• AutoFact: Intron maturase, type II family protein n=2 Tax=Arabidopsis thaliana RepID=Q9FJR9_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized mitochondrial protein ymf11-like 0.0
Internal
sp_v2.0_unigene11838 SustainPine v2.0 832
• AutoFact: ATP binding protein [Arabidopsis thaliana] gb|AAR97892.1| [4Fe-4S] cluster assembly factor [Arabidopsis thaliana] dbj|BAE98532.1| putative mrp protein [Arabidopsis thaliana] gb|AEE76897.1| ATP binding protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein mrp homolog 0.0
C-terminus
sp_v2.0_unigene12479 SustainPine v2.0 767
• AutoFact: Tyrosyl-tRNA synthetase, putative n=1 Tax=Ricinus communis RepID=B9RGT2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: tyrosyl-trna synthetase-like 0.0
C-terminus
sp_v2.0_unigene12684 SustainPine v2.0 819
• AutoFact: pfam07714, Pkinase_Tyr, Protein tyrosine kinase 1.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene12745 SustainPine v2.0 193
• AutoFact: Unassigned protein
• Blast2go: p150 7.49475e-17
Putative ncRNA
sp_v2.0_unigene13200 SustainPine v2.0 618
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 3.0e-30
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Blast2go: reverse transcriptase 5.32025e-30
Putative Complete
sp_v2.0_unigene13340 SustainPine v2.0 293
• AutoFact: Reverse transcriptase (Fragment) n=2 Tax=Peperomia caperata RepID=Q56GE9_PEPCA 3.0e-32
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Blast2go: reverse transcriptase 3.62936e-43
Putative N-terminus
sp_v2.0_unigene13492 SustainPine v2.0 144
• AutoFact: DNA mismatch repair protein MLH1 [Arabidopsis thaliana] emb|CAA10163.1| MLH1 protein [Arabidopsis thaliana] emb|CAB78038.1| MLH1 protein [Arabidopsis thaliana] gb|AEE82726.1| DNA mismatch repair protein MLH1 [Arabidopsis thaliana] 1.0e-08
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: dna mismatch repair protein mlh1 3.35693e-13
Internal
sp_v2.0_unigene13948 SustainPine v2.0 596
• AutoFact: Maturase (Fragment) n=1 Tax=Pinus sp. Qiu 94013 RepID=Q9T671_9CONI 0.0
• FL-Next: tr=MatR; Abies nephrolepis. Mitochondrion. 0.0
• Blast2go: maturase 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain