Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: RNA-directed DNA polymerase activity

Term: GO:0003964  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene282 SustainPine v2.0 2299
AutoFact: pfam00665, rve, Integrase core domain 5.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Complete
sp_v2.0_unigene3237 SustainPine v2.0 1673
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: phosphatidate phosphatase lpin3 1.23193e-20
C-terminus
sp_v2.0_unigene3579 SustainPine v2.0 1463
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
N-terminus
sp_v2.0_unigene3803 SustainPine v2.0 1160
AutoFact: putative helicase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-like helicase domain-containing protein 0.0
Putative C-terminus
sp_v2.0_unigene4176 SustainPine v2.0 1836
AutoFact: Intron maturase, type II family protein [Arabidopsis thaliana] dbj|BAB10231.1| unnamed protein product [Arabidopsis thaliana] gb|AED95448.1| Intron maturase, type II family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized mitochondrial protein ymf11-like 0.0
C-terminus
sp_v2.0_unigene4213 SustainPine v2.0 1136
AutoFact: NUC130/3NT and SDA1 domain-containing protein [Arabidopsis thaliana] dbj|BAE98871.1| hypothetical protein [Arabidopsis thaliana] gb|AEE28977.1| NUC130/3NT and SDA1 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=F3F19.18; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein sda1 homolog 0.0
N-terminus
sp_v2.0_unigene4974 SustainPine v2.0 1060
AutoFact: Type II intron maturase family protein n=4 Tax=Andropogoneae RepID=B6SWF1_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized mitochondrial protein ymf11-like 0.0
Internal
sp_v2.0_unigene5159 SustainPine v2.0 1155
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_64.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7T395_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein pns1 0.0
C-terminus
sp_v2.0_unigene6871 SustainPine v2.0 1548
AutoFact: Transmembrane protein TPARL, putative n=1 Tax=Ricinus communis RepID=B9RWP5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Complete
sp_v2.0_unigene7355 SustainPine v2.0 2789
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
N-terminus
sp_v2.0_unigene11442 SustainPine v2.0 730
AutoFact: protein trichome birefringence-like 5 [Arabidopsis thaliana] gb|AED92864.1| protein trichome birefringence-like 5 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein trichome birefringence-like 5 0.0
Internal
sp_v2.0_unigene11482 SustainPine v2.0 607
AutoFact: Intron maturase, type II family protein n=2 Tax=Arabidopsis thaliana RepID=Q9FJR9_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized mitochondrial protein ymf11-like 0.0
Internal
sp_v2.0_unigene11838 SustainPine v2.0 832
AutoFact: ATP binding protein [Arabidopsis thaliana] gb|AAR97892.1| [4Fe-4S] cluster assembly factor [Arabidopsis thaliana] dbj|BAE98532.1| putative mrp protein [Arabidopsis thaliana] gb|AEE76897.1| ATP binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein mrp homolog 0.0
C-terminus
sp_v2.0_unigene12479 SustainPine v2.0 767
AutoFact: Tyrosyl-tRNA synthetase, putative n=1 Tax=Ricinus communis RepID=B9RGT2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: tyrosyl-trna synthetase-like 0.0
C-terminus
sp_v2.0_unigene12684 SustainPine v2.0 819
AutoFact: pfam07714, Pkinase_Tyr, Protein tyrosine kinase 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene12745 SustainPine v2.0 193
AutoFact: Unassigned protein
Blast2go: p150 7.49475e-17
Putative ncRNA
sp_v2.0_unigene13200 SustainPine v2.0 618
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 3.0e-30
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: reverse transcriptase 5.32025e-30
Putative Complete
sp_v2.0_unigene13281 SustainPine v2.0 131
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 1.73073e-14
Internal
sp_v2.0_unigene13315 SustainPine v2.0 486
AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 1.56398e-40
Internal
sp_v2.0_unigene13340 SustainPine v2.0 293
AutoFact: Reverse transcriptase (Fragment) n=2 Tax=Peperomia caperata RepID=Q56GE9_PEPCA 3.0e-32
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: reverse transcriptase 3.62936e-43
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain