Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: DNA metabolic process

Term: GO:0006259  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene3374 SustainPine v2.0 1726
AutoFact: ATP-dependent DNA helicase RecG [Synechococcus elongatus PCC 6301] ref|YP_400096.1| ATP-dependent DNA helicase RecG [Synechococcus elongatus PCC 7942] dbj|BAD78660.1| ATP-dependent DNA helicase RecG [Synechococcus elongatus PCC 6301] gb|ABB57109.1| ATP-de 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent dna helicase 0.0
Complete
sp_v2.0_unigene3474 SustainPine v2.0 3181
AutoFact: mRNA capping enzyme-like protein [Arabidopsis thaliana] gb|AEE74723.1| mRNA capping enzyme-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: mrna-capping enzyme-like 0.0
Complete
sp_v2.0_unigene5622 SustainPine v2.0 567
AutoFact: Chromo domain containing protein 8.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: hypothetical protein VITISV_014148 [Vitis vinifera] 3.14713e-23
C-terminus
sp_v2.0_unigene7342 SustainPine v2.0 418
AutoFact: Glutamate receptor n=1 Tax=Sorghum bicolor RepID=C5X740_SORBI 7.0e-12
FL-Next: sp=Glutamate receptor 3.1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: glutamate receptor -like 1.22615e-14
Putative N-terminus
sp_v2.0_unigene7731 SustainPine v2.0 1249
AutoFact: putative RecA protein [Oryza sativa Japonica Group] 8.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair protein reca homolog mitochondrial-like 1.03698e-27
C-terminus
sp_v2.0_unigene8003 SustainPine v2.0 813
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 5.0e-18
FL-Next: sp=60S ribosomal protein L31; Picea mariana (Black spruce) (Abies mariana). 0.0
Blast2go: reverse transcriptase 2.24314e-20
N-terminus
sp_v2.0_unigene8067 SustainPine v2.0 1630
AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Putative Complete
sp_v2.0_unigene8198 SustainPine v2.0 905
AutoFact: Calmodulin binding protein, putative n=1 Tax=Ricinus communis RepID=B9RJ06_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: iq domain-containing protein 0.0
Putative N-terminus
sp_v2.0_unigene8486 SustainPine v2.0 867
AutoFact: double-strand break repair protein MRE11 [Arabidopsis thaliana] sp|Q9XGM2.1|MRE11_ARATH RecName: Full=Double-strand break repair protein MRE11 emb|CAB50793.1| Mre11 protein [Arabidopsis thaliana] dbj|BAB10749.1| DNA repair and meiosis protein Mre11 [Arabi 1.0e-11
FL-Next: sp=Double-strand break repair protein MRE11; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: meiotic recombination 11 1.40712e-14
C-terminus
sp_v2.0_unigene11399 SustainPine v2.0 441
AutoFact: Os07g0681600 protein n=3 Tax=Oryza sativa RepID=Q7XHW1_ORYSJ 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: werner syndrome atp-dependent helicase-like 3.73771e-11
C-terminus
sp_v2.0_unigene13303 SustainPine v2.0 538
AutoFact: ATP-dependent DNA helicase RecQ [Desulfotomaculum reducens MI-1] gb|ABO49795.1| ATP-dependent DNA helicase, RecQ-like protein [Desulfotomaculum reducens MI-1] 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: atp-dependent dna helicase 0.0
Internal
sp_v2.0_unigene13572 SustainPine v2.0 412
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 3.0e-22
FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
Blast2go: retrotransposon unclassified 3.07513e-22
Internal
sp_v2.0_unigene17015 SustainPine v2.0 1971
AutoFact: Flap endonuclease 1 n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=FEN1_OSTLU 0.0
FL-Next: sp=Flap endonuclease 1; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: flap endonuclease-1 0.0
Complete
sp_v2.0_unigene25716 SustainPine v2.0 742
AutoFact: DNA helicase RECQE-like n=2 Tax=Oryza sativa RepID=Q6K831_ORYSJ 2.0e-13
FL-Next: Isoform 2 of ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana GN=RECQL3 0.0
Blast2go: atp-dependent dna helicase q-like 3 2.50183e-15
C-terminus
sp_v2.0_unigene28372 SustainPine v2.0 792
AutoFact: DNA repair protein recA, putative [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair protein 0.0
C-terminus
sp_v2.0_unigene37063 SustainPine v2.0 314
AutoFact: RecQ-like helicase 2 [Oryza sativa Japonica Group] 9.80909e-45
FL-Next: Isoform 2 of ATP-dependent DNA helicase Q-like 2 OS=Arabidopsis thaliana GN=RECQL2 0.0
Blast2go: atp-dependent dna family expressed 0.0
Internal
sp_v2.0_unigene37616 SustainPine v2.0 354
AutoFact: DNA topoisomerase n=1 Tax=Ricinus communis RepID=B9SPT5_RICCO 1.0e-31
FL-Next: sp=DNA topoisomerase; Ricinus communis (Castor bean). 0.0
Blast2go: dna topoisomerase 1-like 2.88532e-31
Internal
sp_v2.0_unigene39426 SustainPine v2.0 452
AutoFact: Emb|CAB86673.1 n=1 Tax=Arabidopsis thaliana RepID=Q9FFY2_ARATH 6.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc knuckle (cchc-type) family protein 6.22725e-20
Internal
sp_v2.0_unigene61565 SustainPine v2.0 668
AutoFact: RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase I gb|AAB41401.1| topoisomerase I [Daucus carota] 1.0e-39
FL-Next: sp=DNA topoisomerase 1; Daucus carota (Carrot). 0.0
Blast2go: dna topoisomerase i 0.0
Internal
sp_v2.0_unigene67289 SustainPine v2.0 592
AutoFact: flap endonuclease-1 [Arabidopsis thaliana] gb|AED93576.1| flap endonuclease-1 [Arabidopsis thaliana] 5.04467e-44
FL-Next: sp=Flap endonuclease 1; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: flap endonuclease-1 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain