Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: 3'-5' exonuclease activity

Term: GO:0008408  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene9292 SustainPine v2.0 2434
AutoFact: small RNA degrading nuclease 3 [Arabidopsis thaliana] sp|Q8RXK2.1|SDN3_ARATH RecName: Full=Small RNA degrading nuclease 3 gb|AAL87318.1| unknown protein [Arabidopsis thaliana] gb|AAN71976.1| unknown protein [Arabidopsis thaliana] gb|AED98317.1| small RNA 0.0
FL-Next: sp=Small RNA degrading nuclease 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: small rna degrading nuclease 3 0.0
N-terminus
sp_v2.0_unigene9420 SustainPine v2.0 1274
AutoFact: DNA polymerase [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna polymerase 0.0
C-terminus
sp_v2.0_unigene9641 SustainPine v2.0 3088
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rrp6-like protein 1 0.0
Putative Complete
sp_v2.0_unigene9947 SustainPine v2.0 1384
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 9.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: werner syndrome-like exonuclease-like 0.0
Complete
sp_v2.0_unigene11374 SustainPine v2.0 2101
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9SC90_RICCO 0.0
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna polymerase alpha catalytic 0.0
C-terminus
sp_v2.0_unigene11908 SustainPine v2.0 936
AutoFact: DNA polymerase n=1 Tax=Populus trichocarpa RepID=B9HHA9_POPTR 0.0
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna polymerase alpha catalytic subunit 0.0
Internal
sp_v2.0_unigene13765 SustainPine v2.0 1403
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: werner syndrome-like exonuclease-like 0.0
Complete
sp_v2.0_unigene38290 SustainPine v2.0 430
AutoFact: 3'-5' exonuclease-related protein n=1 Tax=Arabidopsis thaliana RepID=F4JTU8_ARATH 9.0e-07
FL-Next: sp=Werner Syndrome-like exonuclease; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: werner syndrome-like exonuclease 8.71139e-08
C-terminus
sp_v2.0_unigene39812 SustainPine v2.0 679
AutoFact: Werner Syndrome-like exonuclease [Arabidopsis thaliana] sp|Q84LH3.1|WEX_ARATH RecName: Full=Werner Syndrome-like exonuclease gb|AAO33765.1| Werner Syndrome-like exonuclease [Arabidopsis thaliana] gb|AAR24686.1| At4g13870 [Arabidopsis thaliana] gb|AEE83339 5.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: werner syndrome-like exonuclease 7.90178e-41
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain