Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: large ribosomal subunit

Term: GO:0015934  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene319 SustainPine v2.0 1166
AutoFact: 50S ribosomal protein L4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l4 0.0
C-terminus
sp_v2.0_unigene1551 SustainPine v2.0 1972
AutoFact: ribosomal protein L18e/L15 [Arabidopsis thaliana] dbj|BAB11434.1| unnamed protein product [Arabidopsis thaliana] gb|AAL91235.1| unknown protein [Arabidopsis thaliana] gb|AAM62464.1| unknown [Arabidopsis thaliana] gb|AAM91243.1| unknown protein [Arabidopsi 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene1577 SustainPine v2.0 1808
AutoFact: Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein [Arabidopsis thaliana] emb|CAB38305.1| ribosomal-like protein [Arabidopsis thaliana] emb|CAB80431.1| ribosomal-like protein [Arabidopsis thaliana] gb|AAL67122.1| AT4g37660/F19F18_150 [Arabi 7.0e-32
FL-Next: sp=50S ribosomal protein L12, chloroplastic; Porphyra yezoensis. Plastid; Chloroplast. 0.0
Blast2go: 50s ribosomal protein l7 l12-like 1.4013e-45
Complete
sp_v2.0_unigene3903 SustainPine v2.0 1328
AutoFact: [J] COG0093 Ribosomal protein L14 6.0e-28
FL-Next: sp=50S ribosomal protein L14, chloroplastic; Abies firma (Momi fir). Plastid; Chloroplast. 0.0
Blast2go: 50s ribosomal protein l14 0.0
Complete
sp_v2.0_unigene4642 SustainPine v2.0 855
AutoFact: Ribosomal protein L22p/L17e family protein [Arabidopsis thaliana] gb|AAM63019.1| unknown [Arabidopsis thaliana] gb|ABF83687.1| At4g28360 [Arabidopsis thaliana] dbj|BAE99833.1| hypothetical protein [Arabidopsis thaliana] gb|AEE85473.1| Ribosomal protein L2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein l17e family protein 0.0
C-terminus
sp_v2.0_unigene6718 SustainPine v2.0 2337
AutoFact: 60S ribosomal protein L26-2 n=2 Tax=Arabidopsis RepID=RL262_ARATH 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l26 0.0
Complete
sp_v2.0_unigene8072 SustainPine v2.0 1440
AutoFact: 50S ribosomal protein L7/L12, putative n=1 Tax=Ricinus communis RepID=B9RB19_RICCO 8.0e-35
FL-Next: sp=50S ribosomal protein L12, chloroplastic; Spinacia oleracea (Spinach). 0.0
Blast2go: ribosomal protein l12 atp-dependent clp protease adaptor protein 1.33824e-42
Complete
sp_v2.0_unigene8218 SustainPine v2.0 1662
AutoFact: ribosomal protein L17-1 [Poa secunda] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l17 0.0
Putative Complete
sp_v2.0_unigene8408 SustainPine v2.0 1184
AutoFact: Magnesium transporter CorA-like-like protein [Arabidopsis thaliana] gb|AAL85000.1| At2g04305/T23O15.7 [Arabidopsis thaliana] gb|AAO11621.1| At2g04305/T23O15.7 [Arabidopsis thaliana] gb|AEC05820.1| Magnesium transporter CorA-like-like protein [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene8413 SustainPine v2.0 1159
AutoFact: ribosomal L.2-like protein [Arabidopsis thaliana] gb|AAL16127.1|AF428295_1 At1g26740/T24P13_11 [Arabidopsis thaliana] gb|AAN18114.1| At1g26740/T24P13_11 [Arabidopsis thaliana] gb|AEE30726.1| ribosomal L.2-like protein [Arabidopsis thaliana] 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene8441 SustainPine v2.0 1233
AutoFact: ribosomal protein L7/L12 domain-containing protein [Arabidopsis thaliana] ref|NP_001185360.1| ribosomal protein L7/L12 domain-containing protein [Arabidopsis thaliana] gb|AAK25833.1|AF360123_1 unknown protein [Arabidopsis thaliana] gb|AAB61098.1| Similar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein l7 l12 domain-containing protein 0.0
Complete
sp_v2.0_unigene8763 SustainPine v2.0 1774
AutoFact: ribosomal protein L18e/L15 [Arabidopsis thaliana] dbj|BAB11434.1| unnamed protein product [Arabidopsis thaliana] gb|AAL91235.1| unknown protein [Arabidopsis thaliana] gb|AAM62464.1| unknown [Arabidopsis thaliana] gb|AAM91243.1| unknown protein [Arabidopsi 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene11342 SustainPine v2.0 716
AutoFact: Ribosomal protein L2 n=1 Tax=Cycas taitungensis RepID=B0BLF2_CYCTA 1.0e-18
FL-Next: sp=60S ribosomal protein L2, mitochondrial; Oryza sativa subsp. japonica (Rice). Mitochondrion. 0.0
Blast2go: ribosomal protein l2 1.73866e-20
Internal
sp_v2.0_unigene12400 SustainPine v2.0 828
AutoFact: ribosomal protein L16a [Coprinopsis cinerea okayama7#130] gb|EAU93058.1| ribosomal protein L16a [Coprinopsis cinerea okayama7#130] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l13a 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain