Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nuclear pore

Term: GO:0005643  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene198 SustainPine v2.0 2128
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_77.assembly12x (Fragment) n=3 Tax=core eudicotyledons RepID=D7SY66_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene921 SustainPine v2.0 2097
AutoFact: nucleoporin 50 protein [Arabidopsis thaliana] gb|AAG51549.1|AC037424_14 unknown protein; 23094-21772 [Arabidopsis thaliana] gb|AAK59765.1| At1g52380/F19K6_4 [Arabidopsis thaliana] gb|AAL15374.1| At1g52380/F19K6_4 [Arabidopsis thaliana] gb|AEE32797.1| nucl 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ran-binding protein 1 domain-containing protein 0.0
Complete
sp_v2.0_unigene1892 SustainPine v2.0 1875
AutoFact: Nucleoporin interacting component; Protein prenyltransferase [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein at2g41620-like 0.0
Complete
sp_v2.0_unigene2570 SustainPine v2.0 1006
AutoFact: Unassigned protein
FL-Next: tr=Exportin-7, putative; Ricinus communis (Castor bean). 0.0
Blast2go: armadillo beta-catenin-like repeat-containing protein 0.0
Putative C-terminus
sp_v2.0_unigene3139 SustainPine v2.0 2394
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_77.assembly12x (Fragment) n=3 Tax=core eudicotyledons RepID=D7SY66_VITVI 0.0
FL-Next: sp=Importin subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene3441 SustainPine v2.0 651
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: armadillo beta-catenin-like repeat-containing protein 0.0
Internal
sp_v2.0_unigene3649 SustainPine v2.0 1550
AutoFact: nuclear pore complex protein-like protein [Arabidopsis thaliana] dbj|BAB09662.1| unnamed protein product [Arabidopsis thaliana] gb|AED90908.1| nuclear pore complex protein-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: nuclear pore complex protein 0.0
C-terminus
sp_v2.0_unigene3688 SustainPine v2.0 3675
AutoFact: Importin-alpha re-exporter, putative n=1 Tax=Ricinus communis RepID=B9SBF8_RICCO 0.0
FL-Next: sp=Exportin-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene4495 SustainPine v2.0 3024
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene4609 SustainPine v2.0 1201
AutoFact: protein tornado 1 [Arabidopsis thaliana] dbj|BAB08571.1| unnamed protein product [Arabidopsis thaliana] gb|AED96644.1| protein tornado 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene4805 SustainPine v2.0 500
AutoFact: Nucleoporin GLE1, putative n=1 Tax=Ricinus communis RepID=B9RMT7_RICCO 2.0e-16
FL-Next: tr=Nucleoporin GLE1, putative; Ricinus communis (Castor bean). 0.0
Blast2go: gle1l protein 3.50236e-16
Internal
sp_v2.0_unigene5784 SustainPine v2.0 360
AutoFact: Armadillo/beta-catenin-like repeat-containing protein n=2 Tax=Arabidopsis RepID=F4IYK6_ARATH 7.0e-36
FL-Next: tr=Armadillo/beta-catenin-like repeat-containing protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: armadillo beta-catenin-like repeat-containing protein 1.71757e-41
Internal
sp_v2.0_unigene5977 SustainPine v2.0 1761
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gb|AAL32805.1| putative protein [Arabidopsis thaliana] gb|AAR23706.1| At4g27640 [Arabidopsis thaliana] gb|AEE85373.1| armadillo/beta-catenin-like repeat-containing protein [Arabi 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: probable importin subunit beta-4-like 0.0
C-terminus
sp_v2.0_unigene6362 SustainPine v2.0 486
AutoFact: nuclear pore complex protein-like protein [Arabidopsis thaliana] dbj|BAB09662.1| unnamed protein product [Arabidopsis thaliana] gb|AED90908.1| nuclear pore complex protein-like protein [Arabidopsis thaliana] 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nuclear pore complex protein 2.85024e-41
Internal
sp_v2.0_unigene7520 SustainPine v2.0 1511
AutoFact: Ethylene-responsive transcription factor 1A n=1 Tax=Medicago truncatula RepID=A9P6A4_MEDTR 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor 1a 0.0
Complete
sp_v2.0_unigene7630 SustainPine v2.0 1822
AutoFact: PREDICTED: similar to protein transporter n=1 Tax=Vitis vinifera RepID=UPI000198299D 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: importin 9 0.0
C-terminus
sp_v2.0_unigene8438 SustainPine v2.0 934
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] dbj|BAB09724.1| importin beta [Arabidopsis thaliana] gb|AED96362.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: importin subunit beta-1-like 0.0
N-terminus
sp_v2.0_unigene9907 SustainPine v2.0 1361
AutoFact: RecName: Full=Importin subunit alpha; AltName: Full=Karyopherin subunit alpha; Short=KAP alpha gb|AAC23722.1| importin alpha [Solanum lycopersicum] 0.0
FL-Next: sp=Importin subunit alpha; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene11269 SustainPine v2.0 3080
AutoFact: Importin-7, putative n=3 Tax=rosids RepID=B9SP38_RICCO 0.0
FL-Next: sp=Exportin-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable importin-7 homolog 0.0
N-terminus
sp_v2.0_unigene11851 SustainPine v2.0 1055
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] dbj|BAB09724.1| importin beta [Arabidopsis thaliana] gb|AED96362.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: importin subunit beta-1-like 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain