Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: sister chromatid cohesion

Term: GO:0007062  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene126 SustainPine v2.0 3090
AutoFact: cohesin-like protein [Oryza sativa Indica Group] gb|EEC71958.1| hypothetical protein OsI_04789 [Oryza sativa Indica Group] 6.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cohesin subunit 0.0
Complete
sp_v2.0_unigene381 SustainPine v2.0 2397
AutoFact: E2F target protein 1 [Arabidopsis thaliana] sp|Q501D5.1|MCMBP_ARATH RecName: Full=Mini-chromosome maintenance complex-binding protein; Short=MCM-BP; Short=MCM-binding protein; AltName: Full=Protein E2F TARGET GENE 1 gb|AAY25444.1| At2g40550 [Arabidopsis t 0.0
FL-Next: sp=Mini-chromosome maintenance complex-binding protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: mini-chromosome maintenance complex-binding 0.0
Complete
sp_v2.0_unigene512 SustainPine v2.0 984
AutoFact: Structural maintenance of chromosomes 5 smc5, putative n=1 Tax=Ricinus communis RepID=B9RVK1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: structural maintenance of chromosomes 5 0.0
Complete
sp_v2.0_unigene1137 SustainPine v2.0 1029
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: structural maintenance of chromosomes protein 3-like 0.0
N-terminus
sp_v2.0_unigene2194 SustainPine v2.0 843
AutoFact: Structural maintenance of chromosomes 6 smc6, putative n=1 Tax=Ricinus communis RepID=B9R9U6_RICCO 0.0
FL-Next: tr=Structural maintenance of chromosomes 6 smc6, putative; Ricinus communis (Castor bean). 0.0
Blast2go: structural maintenance of chromosomes protein 6-like 0.0
Internal
sp_v2.0_unigene3068 SustainPine v2.0 1078
AutoFact: Sister chromatid cohesion 1 protein 2 n=4 Tax=Arabidopsis RepID=SCC12_ARATH 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sister chromatid cohesion 1 protein 2 0.0
C-terminus
sp_v2.0_unigene3340 SustainPine v2.0 2033
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: smc3 protein 0.0
Putative Complete
sp_v2.0_unigene7635 SustainPine v2.0 1119
AutoFact: structural maintenance of chromosomes (SMC) - like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: structural maintenance of chromosomes 1 0.0
Putative N-terminus
sp_v2.0_unigene8322 SustainPine v2.0 2734
AutoFact: structural maintenance of chromosomes 1 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: structural maintenance of chromosomes 1 0.0
Complete
sp_v2.0_unigene11263 SustainPine v2.0 993
AutoFact: SMC-like protein [Arabidopsis thaliana] gb|AAD54770.1|AF120933_1 SMC-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: structural maintenance of chromosomes protein 6-like 0.0
C-terminus
sp_v2.0_unigene11774 SustainPine v2.0 2659
AutoFact: structural maintenance of chromosomes 5 [Arabidopsis thaliana] emb|CAC01791.1| putative protein [Arabidopsis thaliana] gb|AED92224.1| structural maintenance of chromosomes 5 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: structural maintenance of chromosomes 5 0.0
Complete
sp_v2.0_unigene14809 SustainPine v2.0 628
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: chromosome transmission fidelity protein 18 homolog 2.01051e-18
Internal
sp_v2.0_unigene17553 SustainPine v2.0 470
AutoFact: E2F target protein 1 [Arabidopsis thaliana] sp|Q501D5.1|MCMBP_ARATH RecName: Full=Mini-chromosome maintenance complex-binding protein; Short=MCM-BP; Short=MCM-binding protein; AltName: Full=Protein E2F TARGET GENE 1 gb|AAY25444.1| At2g40550 [Arabidopsis t 3.0e-14
FL-Next: sp=Mini-chromosome maintenance complex-binding protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: mini-chromosome maintenance complex-binding 6.40029e-20
N-terminus
sp_v2.0_unigene25337 SustainPine v2.0 629
AutoFact: Cohesin subunit rad21, putative n=1 Tax=Ricinus communis RepID=B9RM05_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cohesin subunit 0.0
N-terminus
sp_v2.0_unigene25885 SustainPine v2.0 612
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: chromosome transmission fidelity protein 18 homolog 0.0
Internal
sp_v2.0_unigene28844 SustainPine v2.0 401
AutoFact: protein MIM [Arabidopsis thaliana] dbj|BAB10445.1| SMC-like protein [Arabidopsis thaliana] gb|AED97471.1| protein MIM [Arabidopsis thaliana] 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: structural maintenance of chromosomes protein 6-like 0.0
Internal
sp_v2.0_unigene32733 SustainPine v2.0 519
AutoFact: pfam06470, SMC_hinge, SMC proteins Flexible Hinge Domain 8.0e-20
FL-Next: tr=Condensin complex component SMC3; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: structural maintenance of chromosomes protein 3-like 0.0
Internal
sp_v2.0_unigene36249 SustainPine v2.0 413
AutoFact: putative SMC protein [Oryza sativa Japonica Group] gb|EEC79459.1| hypothetical protein OsI_20467 [Oryza sativa Indica Group] gb|EEE64226.1| hypothetical protein OsJ_19059 [Oryza sativa Japonica Group] 9.0e-13
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: structural maintenance of chromosomes protein 4 4.60441e-15
Putative N-terminus
sp_v2.0_unigene38346 SustainPine v2.0 322
AutoFact: SMC_N domain containing protein 2.0e-06
FL-Next: tr=Structural maintenance of chromosome, putative; Ricinus communis (Castor bean). 0.0
Blast2go: chromosome associated protein 1.40117e-38
Internal
sp_v2.0_unigene38904 SustainPine v2.0 302
AutoFact: Protein MIM n=3 Tax=Arabidopsis RepID=Q9FII7_ARATH 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: protein mim 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain