Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: cytosolic small ribosomal subunit

Term: GO:0022627  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene5411 SustainPine v2.0 1269
• AutoFact: 40S ribosomal protein S11-1 n=11 Tax=core eudicotyledons RepID=RS111_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s11 0.0
Complete
sp_v2.0_unigene7159 SustainPine v2.0 1477
• AutoFact: 40S ribosomal protein S15a-1 n=32 Tax=Tracheophyta RepID=R15A1_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene8622 SustainPine v2.0 1247
• AutoFact: 40S ribosomal protein S15a-5 [Arabidopsis thaliana] ref|XP_002869431.1| RPS15AE [Arabidopsis lyrata subsp. lyrata] sp|Q9M0E0.1|R15A5_ARATH RecName: Full=40S ribosomal protein S15a-5 emb|CAB79701.1| ribosomal protein S15a homolog [Arabidopsis thaliana] gb| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s15a-5 0.0
Complete
sp_v2.0_unigene9709 SustainPine v2.0 1045
• AutoFact: Ribosomal protein S27 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SLV7_PHYPA 2.0e-33
• FL-Next: sp=Ribosomal protein S27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosomal protein s27 1.4013e-44
Complete
sp_v2.0_unigene11256 SustainPine v2.0 1042
• AutoFact: small subunit ribosomal protein S17 [Arabidopsis thaliana] gb|AAD43160.1|AC007504_15 Putative ribosomal protein [Arabidopsis thaliana] dbj|BAC42717.1| unknown protein [Arabidopsis thaliana] gb|AAO50680.1| putative 40S ribosomal protein S17 [Arabidopsis th 1.0e-33
• FL-Next: sp=30S ribosomal protein S17, chloroplastic; Thalassiosira pseudonana (Marine diatom) (Cyclotella nana). Plastid; Chloroplast. 0.0
• Blast2go: 30s ribosomal protein s17 2.8026e-45
Complete
sp_v2.0_unigene15398 SustainPine v2.0 727
• AutoFact: 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_200478.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_565458.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|XP_002866160.1| 40S ribosomal protein S30 [Arabidopsis lyrata subsp. l 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s30 1.23442e-26
Complete
sp_v2.0_unigene15427 SustainPine v2.0 992
• AutoFact: 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_190089.2| 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_001078781.1| 40S ribosomal protein S20-1 [Arabidopsis thaliana] sp|P49200.2|RS201_ARATH RecName: Full=40S ribosomal protein S20-1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s20 0.0
Complete
sp_v2.0_unigene15443 SustainPine v2.0 1029
• AutoFact: Ribosomal protein S27 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SLV7_PHYPA 9.0e-34
• FL-Next: sp=Ribosomal protein S27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.26117e-44
Complete
sp_v2.0_unigene15457 SustainPine v2.0 1047
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 2.0e-38
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene15463 SustainPine v2.0 935
• AutoFact: 40S ribosomal protein S27-2 n=34 Tax=Embryophyta RepID=RS272_ARATH 5.0e-31
• FL-Next: sp=Ribosomal protein S27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosomal protein s27 3.66258e-33
Complete
sp_v2.0_unigene15599 SustainPine v2.0 814
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 1.0e-38
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene15867 SustainPine v2.0 887
• AutoFact: 40S ribosomal protein S29 n=4 Tax=Magnoliophyta RepID=RS29_ARATH 9.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s29 9.15945e-35
Complete
sp_v2.0_unigene15989 SustainPine v2.0 1031
• AutoFact: 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis ly 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pointed first leaf 0.0
Complete
sp_v2.0_unigene16180 SustainPine v2.0 1096
• AutoFact: 40S ribosomal protein S11-1 n=11 Tax=core eudicotyledons RepID=RS111_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s11 0.0
Complete
sp_v2.0_unigene16367 SustainPine v2.0 590
• AutoFact: 40S ribosomal protein S29 n=4 Tax=Magnoliophyta RepID=RS29_ARATH 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s29 3.2073e-37
Complete
sp_v2.0_unigene16408 SustainPine v2.0 747
• AutoFact: 40S ribosomal protein S29 n=4 Tax=Magnoliophyta RepID=RS29_ARATH 6.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s29 2.64413e-35
Complete
sp_v2.0_unigene16457 SustainPine v2.0 463
• AutoFact: 40S ribosomal protein S15a-4 [Arabidopsis thaliana] sp|Q9LX88.3|R15A4_ARATH RecName: Full=40S ribosomal protein S15a-4 emb|CAB90931.1| cytoplasmic ribosomal protein S15a-like [Arabidopsis thaliana] gb|AAK76511.1| putative cytoplasmic ribosomal protein S15 5.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s15a 1.67372e-18
C-terminus
sp_v2.0_unigene16580 SustainPine v2.0 807
• AutoFact: 40S ribosomal protein S29 n=4 Tax=Magnoliophyta RepID=RS29_ARATH 7.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s29 4.50017e-35
Complete
sp_v2.0_unigene16638 SustainPine v2.0 650
• AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RHY5_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s5 0.0
N-terminus
sp_v2.0_unigene17049 SustainPine v2.0 664
• AutoFact: 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_200478.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_565458.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|XP_002866160.1| 40S ribosomal protein S30 [Arabidopsis lyrata subsp. l 5.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s30 7.23255e-27
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain