Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: cytoplasmic mRNA processing body

Term: GO:0000932  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1853 SustainPine v2.0 1525
AutoFact: mRNA-decapping enzyme subunit 2 [Arabidopsis thaliana] dbj|BAC43684.1| unknown protein [Arabidopsis thaliana] gb|AAO63396.1| At5g13570 [Arabidopsis thaliana] gb|AED91912.1| mRNA-decapping enzyme subunit 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene3866 SustainPine v2.0 1395
AutoFact: enhancer of mRNA-decapping protein 4 [Arabidopsis thaliana] gb|AEE75331.1| enhancer of mRNA-decapping protein 4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: enhancer of mrna-decapping protein 4 0.0
C-terminus
sp_v2.0_unigene6007 SustainPine v2.0 1904
AutoFact: Dcp1-like decapping family, putative [Oryza sativa Japonica Group] gb|ABA91529.1| mRNA decapping enzyme, putative, expressed [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mrna-decapping enzyme-like protein 0.0
Complete
sp_v2.0_unigene11203 SustainPine v2.0 2739
AutoFact: polypyrimidine tract-binding protein 2 [Arabidopsis thaliana] sp|Q9FGL9.1|PTBP2_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 2 dbj|BAB08421.1| polypyrimidine tract-binding RNA transport protein-like [Arabidopsis thaliana] gb|AAU90050.1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene14534 SustainPine v2.0 2051
AutoFact: polypyrimidine track-binding protein homologue [Cicer arietinum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polypyrimidine tract-binding protein homolog 3-like 0.0
Complete
sp_v2.0_unigene14925 SustainPine v2.0 1159
AutoFact: mRNA-decapping enzyme-like protein n=2 Tax=Arabidopsis RepID=DCP1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mrna-decapping enzyme-like protein 0.0
N-terminus
sp_v2.0_unigene17884 SustainPine v2.0 1184
AutoFact: mRNA decapping enzyme 2; K12613 mRNA-decapping enzyme subunit 2 [EC:3.-.-.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene18685 SustainPine v2.0 1507
AutoFact: similar to yeast dcp1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mrna-decapping enzyme-like protein 0.0
Complete
sp_v2.0_unigene27938 SustainPine v2.0 1227
AutoFact: polypyrimidine tract-binding protein-like [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polypyrimidine tract binding 0.0
N-terminus
sp_v2.0_unigene29616 SustainPine v2.0 880
AutoFact: polypyrimidine tract-binding protein 2 [Arabidopsis thaliana] sp|Q9FGL9.1|PTBP2_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 2 dbj|BAB08421.1| polypyrimidine tract-binding RNA transport protein-like [Arabidopsis thaliana] gb|AAU90050.1 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polypyrimidine tract binding 5.90211e-32
N-terminus
sp_v2.0_unigene33773 SustainPine v2.0 708
AutoFact: enhancer of mRNA-decapping protein 4 [Arabidopsis thaliana] gb|AEE75331.1| enhancer of mRNA-decapping protein 4 [Arabidopsis thaliana] 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: enhancer of mrna-decapping protein 4 8.38014e-21
C-terminus
sp_v2.0_unigene63598 SustainPine v2.0 598
AutoFact: Polypyrimidine tract-binding protein homolog 3 n=4 Tax=Arabidopsis RepID=PTBP3_ARATH 7.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polypyrimidine tract-binding protein 3 0.0
N-terminus
sp_v2.0_unigene67003 SustainPine v2.0 343
AutoFact: Polypyrimidine tract binding protein, putative n=1 Tax=Ricinus communis RepID=B9SE84_RICCO 7.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polypyrimidine tract-binding protein 3 5.02169e-41
Putative C-terminus
sp_v2.0_unigene80107 SustainPine v2.0 464
AutoFact: mRNA decapping enzyme 1A, putative n=1 Tax=Ricinus communis RepID=B9SCX2_RICCO 7.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mrna-decapping enzyme-like protein 2.97636e-42
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain