Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: cyclic nucleotide binding

Term: GO:0030551  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1114 SustainPine v2.0 2258
AutoFact: Cyclic nucleotide-gated ion channel, putative n=1 Tax=Ricinus communis RepID=B9STR6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclic nucleotide gated channel 0.0
Putative C-terminus
sp_v2.0_unigene1241 SustainPine v2.0 958
AutoFact: Potassium channel AKT1, putative n=1 Tax=Ricinus communis RepID=B9STQ4_RICCO 1.0e-11
FL-Next: sp=Probable potassium channel AKT5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: akt1-like k+ channel 1 5.52341e-13
Internal
sp_v2.0_unigene1576 SustainPine v2.0 2822
AutoFact: cyclic nucleotide-gated ion channel 1 [Arabidopsis thaliana] sp|O65717.1|CNGC1_ARATH RecName: Full=Cyclic nucleotide-gated ion channel 1; Short=AtCNGC1; AltName: Full=Cyclic nucleotide- and calmodulin-regulated ion channel 1 gb|AAK43954.1|AF370139_1 putat 0.0
FL-Next: sp=Cyclic nucleotide-gated ion channel 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cyclic nucleotide gated channel 0.0
Complete
sp_v2.0_unigene2831 SustainPine v2.0 1156
AutoFact: putative cyclic nucleotide-regulated ion channel protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cyclic nucleotide-gated ion 0.0
C-terminus
sp_v2.0_unigene5133 SustainPine v2.0 2188
AutoFact: putative inward rectifying potassium channel [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium channel 0.0
C-terminus
sp_v2.0_unigene9064 SustainPine v2.0 531
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TK47_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inward rectifying potassium channel 0.0
Internal
sp_v2.0_unigene12646 SustainPine v2.0 532
AutoFact: Inward rectifying shaker-like K+ channel n=4 Tax=Vitis vinifera RepID=D0R6Q1_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium channel 0.0
Internal
sp_v2.0_unigene13244 SustainPine v2.0 1524
AutoFact: cyclic nucleotide gated channel [Arabidopsis thaliana] emb|CAB40130.1| cyclic nucleotide and calmodulin-regulated ion channel [Arabidopsis thaliana] dbj|BAB08864.1| cyclic nucleotide and calmodulin-regulated ion channel [Arabidopsis thaliana] gb|AED96975. 0.0
FL-Next: Isoform 2 of Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana GN=CNGC5 0.0
Blast2go: cyclic nucleotide gated channel 0.0
Putative N-terminus
sp_v2.0_unigene14496 SustainPine v2.0 450
AutoFact: Cyclic nucleotide-gated ion channel 2 n=5 Tax=Brassicaceae RepID=CNGC2_ARATH 0.0
FL-Next: sp=Cyclic nucleotide-gated ion channel 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dnd1 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain