Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: regulation of circadian rhythm

Term: GO:0042752  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1331 SustainPine v2.0 1447
AutoFact: Type A response regulator RR1 n=1 Tax=Phaseolus vulgaris RepID=B0YGG5_PHAVU 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: type a response regulator 0.0
Complete
sp_v2.0_unigene9913 SustainPine v2.0 572
AutoFact: Protein FAM50A, putative n=2 Tax=fabids RepID=B9STC7_RICCO 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein xap5 circadian timekeeper 3.92848e-35
N-terminus
sp_v2.0_unigene11111 SustainPine v2.0 732
AutoFact: transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] gb|AAM10317.1| AT3g20810/MOE17_10 [Arabidopsis thaliana] gb|AAM78048.1| AT3g20810/MOE17_10 [Arabidopsis thaliana] gb|AEE76425.1| transcription factor jumonji (jmjC) domai 0.0
FL-Next: Isoform 2 of F-box protein At5g06550 OS=Arabidopsis thaliana GN=At5g06550 0.0
Blast2go: transcription factor jumonji domain-containing protein 0.0
C-terminus
sp_v2.0_unigene11139 SustainPine v2.0 990
AutoFact: Protein FAM50A, putative n=2 Tax=fabids RepID=B9STC7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene27145 SustainPine v2.0 1634
AutoFact: Protein SENSITIVITY TO RED LIGHT REDUCED, putative n=1 Tax=Ricinus communis RepID=B9S4K4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sensitivity to red light reduced protein 0.0
Complete
sp_v2.0_unigene27918 SustainPine v2.0 381
AutoFact: Auxin-resistance protein 6 (Fragment) n=2 Tax=Arabidopsis thaliana RepID=A5YXU7_ARATH 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin-resistance protein 6 0.0
Internal
sp_v2.0_unigene28278 SustainPine v2.0 1224
AutoFact: Protein SENSITIVITY TO RED LIGHT REDUCED, putative n=1 Tax=Ricinus communis RepID=B9S4K4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sensitivity to red light reduced protein 0.0
Complete
sp_v2.0_unigene39008 SustainPine v2.0 329
AutoFact: Response regulator 1 n=1 Tax=Pinus pinea RepID=C0LLL0_PINPI 3.0e-30
FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
Blast2go: type-a response regulator 1.2697e-38
Internal
sp_v2.0_unigene51758 SustainPine v2.0 447
AutoFact: Two-component response regulator ARR3 n=3 Tax=Arabidopsis RepID=ARR3_ARATH 3.0e-22
FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
Blast2go: two-component sensor protein histidine protein 7.69687e-27
N-terminus
sp_v2.0_unigene57350 SustainPine v2.0 263
AutoFact: response regulator protein [Dianthus caryophyllus] 2.0e-12
FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
Blast2go: type a response regulator 5.03873e-28
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain