Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: regulation of chlorophyll biosynthetic process

Term: GO:0010380  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene3147 SustainPine v2.0 1492
• AutoFact: Thioredoxin reductase n=1 Tax=Picea sitchensis RepID=B8LPW6_PICSI 0.0
• FL-Next: sp=Thioredoxin reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nadph-dependent thioredoxin reductase 3-like 0.0
C-terminus
sp_v2.0_unigene4965 SustainPine v2.0 3460
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chaperone protein chloroplastic-like 0.0
Complete
sp_v2.0_unigene5084 SustainPine v2.0 884
• AutoFact: U-box domain-containing protein 44 [Arabidopsis thaliana] sp|Q9LM76.1|PUB44_ARATH RecName: Full=U-box domain-containing protein 44; AltName: Full=Plant U-box protein 44; AltName: Full=Protein SENESCENCE-ASSOCIATED E3 UBIQUITIN LIGASE 1 gb|AAF80621.1|AC069 1.0e-17
• FL-Next: Isoform 2 of U-box domain-containing protein 44 OS=Arabidopsis thaliana GN=PUB44 0.0
• Blast2go: protein 3.38845e-27
N-terminus
sp_v2.0_unigene7421 SustainPine v2.0 768
• AutoFact: ATP-binding cassette transporter, subfamily B, member 10, group ATM protein PpABCB10 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TV53_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: abc transporter-like protein 0.0
C-terminus
sp_v2.0_unigene11047 SustainPine v2.0 385
• AutoFact: Transporter ATM1, mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9T3V9_RICCO 1.0e-32
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Blast2go: abc transporter b family member mitochondrial-like 4.25317e-39
C-terminus
sp_v2.0_unigene12252 SustainPine v2.0 1390
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SJG4_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: abc transporter family of the mitochondria family 0.0
Putative N-terminus
sp_v2.0_unigene13426 SustainPine v2.0 1523
• AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Flags: Precursor gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chaperone protein chloroplastic-like 0.0
Complete
sp_v2.0_unigene14573 SustainPine v2.0 2532
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9R8Q6_RICCO 0.0
• FL-Next: sp=U-box domain-containing protein 44; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene18829 SustainPine v2.0 1046
• AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplastic; Flags: Precursor gb|AAA33680.1| nuclear encoded precursor to chloroplast protein [Pisum sativum] 0.0
• FL-Next: sp=Chaperone protein ClpC, chloroplastic; Pisum sativum (Garden pea). 0.0
• Blast2go: chaperone protein chloroplastic-like 0.0
N-terminus
sp_v2.0_unigene21084 SustainPine v2.0 1138
• AutoFact: ATP-dependent Clp protease ATP-binding subunit ClpC [Arabidopsis thaliana] dbj|BAB08738.1| ATP-dependent Clp protease, ATP-binding subunit [Arabidopsis thaliana] gb|AAM26692.1| AT5g50920/K3K7_7 [Arabidopsis thaliana] dbj|BAE99213.1| ATP-dependent Clp prot 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp-dependent clp 0.0
Putative C-terminus
sp_v2.0_unigene24975 SustainPine v2.0 3011
• AutoFact: Putative type-b response regulator (Sensor histidine kinase) n=1 Tax=Malus x domestica RepID=E4Z8Q8_MALDO 8.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: two-component response regulator arr2-like 1.00893e-43
C-terminus
sp_v2.0_unigene25307 SustainPine v2.0 1009
• AutoFact: U-box domain-containing protein 44 [Arabidopsis thaliana] sp|Q9LM76.1|PUB44_ARATH RecName: Full=U-box domain-containing protein 44; AltName: Full=Plant U-box protein 44; AltName: Full=Protein SENESCENCE-ASSOCIATED E3 UBIQUITIN LIGASE 1 gb|AAF80621.1|AC069 8.0e-28
• FL-Next: sp=U-box domain-containing protein 44; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene25768 SustainPine v2.0 314
• AutoFact: Transporter ATM1, mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9T3V9_RICCO 7.00649e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: abc transporter family of the mitochondria family 0.0
Internal
sp_v2.0_unigene28467 SustainPine v2.0 1898
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chaperone protein chloroplastic-like 0.0
Complete
sp_v2.0_unigene36640 SustainPine v2.0 778
• AutoFact: Thioredoxin reductase n=1 Tax=Picea sitchensis RepID=B8LRB6_PICSI 0.0
• FL-Next: sp=Thioredoxin reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nadph-dependent thioredoxin reductase 3-like 0.0
Internal
sp_v2.0_unigene38816 SustainPine v2.0 487
• AutoFact: U-box domain-containing protein 44 [Arabidopsis thaliana] sp|Q9LM76.1|PUB44_ARATH RecName: Full=U-box domain-containing protein 44; AltName: Full=Plant U-box protein 44; AltName: Full=Protein SENESCENCE-ASSOCIATED E3 UBIQUITIN LIGASE 1 gb|AAF80621.1|AC069 2.0e-14
• FL-Next: sp=U-box domain-containing protein 44; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 9.51482e-43
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain