Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: PSII associated light-harvesting complex II catabolic process

Term: GO:0010304  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene746 SustainPine v2.0 2533
• AutoFact: Precursor of protein cell division protease ftsh-like protein n=4 Tax=Magnoliophyta RepID=B9GQ31_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chloroplast protease 0.0
Complete
sp_v2.0_unigene3562 SustainPine v2.0 2704
• AutoFact: ATP-dependent zinc metalloprotease FTSH 2, chloroplastic n=6 Tax=Poaceae RepID=FTSH2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic-like 0.0
Complete
sp_v2.0_unigene3749 SustainPine v2.0 1317
• AutoFact: senescence-inducible chloroplast stay-green protein 1 [Solanum lycopersicum] gb|ACB56587.1| green flesh protein [Solanum lycopersicum] gb|ACV60215.1| green flesh protein [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: senescence-inducible chloroplast stay-green protein 0.0
Complete
sp_v2.0_unigene9905 SustainPine v2.0 2230
• AutoFact: cell division protease ftsH-11 [Arabidopsis thaliana] sp|Q9FGM0.1|FTSHB_ARATH RecName: Full=ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial; Short=AtFTSH11; Flags: Precursor dbj|BAB08420.1| cell division protein FtsH protease-like 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic mitochondrial-like 0.0
Putative Complete
sp_v2.0_unigene11007 SustainPine v2.0 1621
• AutoFact: ATP-dependent peptidase, putative n=1 Tax=Ricinus communis RepID=B9RIL2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic mitochondrial-like 0.0
N-terminus
sp_v2.0_unigene32778 SustainPine v2.0 186
• AutoFact: Cell division protein ftsH, putative n=1 Tax=Ricinus communis RepID=B9T0U0_RICCO 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cell division protease ftsh-6 3.73443e-18
Internal
sp_v2.0_unigene35843 SustainPine v2.0 435
• AutoFact: chlorophyll(ide) b reductase [Arabidopsis thaliana] sp|Q93ZA0.1|NYC1_ARATH RecName: Full=Probable chlorophyll(ide) b reductase NYC1, chloroplastic; AltName: Full=Protein NON-YELLOW COLORING 1; Short=AtNYC1; Flags: Precursor gb|AAL15327.1| AT4g13250/F17N18 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable chlorophyll b reductase chloroplastic-like 0.0
C-terminus
sp_v2.0_unigene49729 SustainPine v2.0 216
• AutoFact: Probable chlorophyll(ide) b reductase NYC1, chloroplastic n=5 Tax=Poaceae RepID=NYC1_ORYSJ 3.0e-20
• FL-Next: sp=Probable chlorophyll(ide) b reductase NYC1, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: chlorophyll b reductase 1.70865e-24
Internal
sp_v2.0_unigene90980 SustainPine v2.0 432
• AutoFact: Ftsh-like protease n=1 Tax=Pisum sativum RepID=Q6A167_PEA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic mitochondrial-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain