Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: chromatin silencing by small RNA

Term: GO:0031048  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1633 SustainPine v2.0 2015
AutoFact: RNA recognition motif-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SU08_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 0.0
N-terminus
sp_v2.0_unigene4299 SustainPine v2.0 1719
AutoFact: FCA gamma [Brassica napus] 1.0e-11
FL-Next: Isoform Alpha of Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA 0.0
Blast2go: flowering time control protein 1.37341e-12
Putative C-terminus
sp_v2.0_unigene4432 SustainPine v2.0 1260
AutoFact: Flowering time control protein-like protein (Fragment) n=1 Tax=Picea sitchensis RepID=E0ZL31_PICSI 7.0e-11
FL-Next: Isoform Alpha of Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA 0.0
Blast2go: flowering time control protein 2.21199e-12
C-terminus
sp_v2.0_unigene6058 SustainPine v2.0 1388
AutoFact: FCA gamma [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding abscisic acid binding protein 0.0
Putative Complete
sp_v2.0_unigene8371 SustainPine v2.0 1953
AutoFact: Flowering time control protein FCA, putative n=1 Tax=Ricinus communis RepID=B9RZT3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein 0.0
Putative Complete
sp_v2.0_unigene11000 SustainPine v2.0 880
AutoFact: FCA gamma [Pisum sativum] 1.0e-17
FL-Next: Isoform Beta of Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA 0.0
Blast2go: flowering time control protein fca-like 1.49858e-21
N-terminus
sp_v2.0_unigene13567 SustainPine v2.0 408
AutoFact: SET domain-containing protein (Fragment) n=2 Tax=Populus trichocarpa RepID=B9HSV4_POPTR 2.0e-12
FL-Next: sp=Histone-lysine N-methyltransferase, H3 lysine-9, H3 lysine-27, H4 lysine-20 and cytosine specific SUVH2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone-lysine n- h3 lysine-9 specific suvh9 4.99668e-14
Internal
sp_v2.0_unigene29558 SustainPine v2.0 725
AutoFact: SET domain protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9N2W3_POPTR 8.00001e-42
FL-Next: sp=Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone-lysine n- h3 lysine-9 specific suvh6 4.48416e-44
Internal
sp_v2.0_unigene42064 SustainPine v2.0 590
AutoFact: FCA gamma [Pisum sativum] 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding abscisic acid binding protein 9.20191e-41
Putative C-terminus
sp_v2.0_unigene65006 SustainPine v2.0 342
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 5.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 8.03753e-21
Putative N-terminus
sp_v2.0_unigene85324 SustainPine v2.0 894
AutoFact: flowering time control protein isoform OsFCA-4 [Oryza sativa Indica Group] 4.0e-11
FL-Next: Isoform Alpha of Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA 0.0
Blast2go: flowering time control protein 1.8133e-13
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain