Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: chloroplast organization

Term: GO:0009658  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene44472 SustainPine v2.0 266
AutoFact: PREDICTED: similar to Protein translocase subunit secA, chloroplastic n=1 Tax=Vitis vinifera RepID=UPI0001983A2B 3.0e-32
FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Pisum sativum (Garden pea). 0.0
Blast2go: protein translocase subunit chloroplastic-like 8.42394e-39
Internal
sp_v2.0_unigene44579 SustainPine v2.0 184
AutoFact: Ribonuclease II/R family protein [Arabidopsis thaliana] gb|AAQ62877.1| At5g02250 [Arabidopsis thaliana] dbj|BAD44146.1| ribonuclease II-like protein [Arabidopsis thaliana] gb|AED90450.1| Ribonuclease II/R family protein [Arabidopsis thaliana] 4.0e-11
FL-Next: tr=EMB2730; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: exoribonuclease ii 5.10125e-14
Internal
sp_v2.0_unigene45619 SustainPine v2.0 1530
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SEX4_RICCO 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: light-regulated zinc finger protein 1 0.0
Putative Complete
sp_v2.0_unigene54468 SustainPine v2.0 531
AutoFact: pfam12854, PPR_1, PPR repeat 5.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.54558e-37
Internal
sp_v2.0_unigene55439 SustainPine v2.0 421
AutoFact: Ribonuclease II, putative n=1 Tax=Ricinus communis RepID=B9T6X7_RICCO 2.0e-33
FL-Next: tr=Ribonuclease II, putative; Ricinus communis (Castor bean). 0.0
Blast2go: uncharacterized ribonuclease sll1290-like 8.43068e-34
Internal
sp_v2.0_unigene55978 SustainPine v2.0 415
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: morn (membrane occupation and recognition nexus) repeat-containing protein 4.11684e-13
Internal
sp_v2.0_unigene57137 SustainPine v2.0 266
AutoFact: ribonuclease II-like protein [Arabidopsis thaliana] 7.0e-16
FL-Next: tr=Putative uncharacterized protein Sb03g039500; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: ribonuclease ii 4.63378e-27
Internal
sp_v2.0_unigene63505 SustainPine v2.0 381
AutoFact: [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 7.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna -lysidine synthase 0.0
Internal
sp_v2.0_unigene65642 SustainPine v2.0 344
AutoFact: putative endoribonuclease E [Oryza sativa Japonica Group] 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rnase e g-like protein 0.0
Internal
sp_v2.0_unigene69559 SustainPine v2.0 212
AutoFact: Pentatricopeptide repeat protein 77 n=1 Tax=Funaria hygrometrica RepID=F5CAE2_FUNHY 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.08301e-11
Internal
sp_v2.0_unigene75555 SustainPine v2.0 377
AutoFact: putative riboflavin biosynthesis protein ribD [Oryza sativa Japonica Group] dbj|BAD21976.1| putative riboflavin biosynthesis protein ribD [Oryza sativa Japonica Group] 6.0e-20
FL-Next: tr=cDNA clone:J013024H13, full insert sequence; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: riboflavin biosynthesis 4.86514e-23
Internal
sp_v2.0_unigene75911 SustainPine v2.0 276
AutoFact: ribonuclease II-like protein [Arabidopsis thaliana] 5.0e-09
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uncharacterized ribonuclease sll1290-like 2.6767e-14
Internal
sp_v2.0_unigene81509 SustainPine v2.0 829
AutoFact: RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) n=4 Tax=Poaceae RepID=RUBA_WHEAT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rubisco subunit binding-protein alpha subunit 0.0
Putative Complete
sp_v2.0_unigene84267 SustainPine v2.0 853
AutoFact: NifU-like protein 2 [Arabidopsis thaliana] sp|Q93W20.1|NIFU2_ARATH RecName: Full=NifU-like protein 2, chloroplastic; Short=AtCNfu2; Short=AtCnfU-V; Flags: Precursor gb|AAK44168.1|AF370353_1 unknown protein [Arabidopsis thaliana] gb|AAL16167.1|AF428399_1 A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nitrogen fixation protein 0.0
C-terminus
sp_v2.0_unigene92233 SustainPine v2.0 650
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain