Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: chloroplast organization

Term: GO:0009658  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene16947 SustainPine v2.0 1134
AutoFact: Triosephosphate isomerase n=2 Tax=Picea sitchensis RepID=A9NUV2_PICSI 0.0
FL-Next: sp=Triosephosphate isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: triosephosphate isomerase 0.0
C-terminus
sp_v2.0_unigene18174 SustainPine v2.0 1602
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SEX4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: light-regulated zinc finger protein 1 0.0
Complete
sp_v2.0_unigene18604 SustainPine v2.0 1860
AutoFact: Phosphoprotein phosphatase, putative n=1 Tax=Ricinus communis RepID=B9RA78_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dual specificity protein phosphatase family protein 0.0
Complete
sp_v2.0_unigene18744 SustainPine v2.0 3092
AutoFact: pfam08839, CDT1, DNA replication factor CDT1 like 1.0e-28
FL-Next: sp=CDT1-like protein a, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cdt1-like protein chloroplastic-like 7.66257e-39
C-terminus
sp_v2.0_unigene18829 SustainPine v2.0 1046
AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplastic; Flags: Precursor gb|AAA33680.1| nuclear encoded precursor to chloroplast protein [Pisum sativum] 0.0
FL-Next: sp=Chaperone protein ClpC, chloroplastic; Pisum sativum (Garden pea). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
N-terminus
sp_v2.0_unigene21084 SustainPine v2.0 1138
AutoFact: ATP-dependent Clp protease ATP-binding subunit ClpC [Arabidopsis thaliana] dbj|BAB08738.1| ATP-dependent Clp protease, ATP-binding subunit [Arabidopsis thaliana] gb|AAM26692.1| AT5g50920/K3K7_7 [Arabidopsis thaliana] dbj|BAE99213.1| ATP-dependent Clp prot 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent clp 0.0
Putative C-terminus
sp_v2.0_unigene25189 SustainPine v2.0 2015
AutoFact: chloroplast protein translocon component Tic40 precursor [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: translocon tic40 0.0
C-terminus
sp_v2.0_unigene25554 SustainPine v2.0 1333
AutoFact: NifU-like protein 2 [Arabidopsis thaliana] sp|Q93W20.1|NIFU2_ARATH RecName: Full=NifU-like protein 2, chloroplastic; Short=AtCNfu2; Short=AtCnfU-V; Flags: Precursor gb|AAK44168.1|AF370353_1 unknown protein [Arabidopsis thaliana] gb|AAL16167.1|AF428399_1 A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nitrogen fixation protein 0.0
Complete
sp_v2.0_unigene25768 SustainPine v2.0 314
AutoFact: Transporter ATM1, mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9T3V9_RICCO 7.00649e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family of the mitochondria family 0.0
Internal
sp_v2.0_unigene26739 SustainPine v2.0 495
AutoFact: cytidine/deoxycytidylate deaminase-like protein [Arabidopsis thaliana] emb|CAB51211.1| putative protein [Arabidopsis thaliana] gb|AEE78275.1| cytidine/deoxycytidylate deaminase-like protein [Arabidopsis thaliana] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 5.44267e-34
Internal
sp_v2.0_unigene28018 SustainPine v2.0 1011
AutoFact: dual specificity protein phosphatase family protein [Arabidopsis thaliana] dbj|BAD18373.1| PROPYZAMIDE-HTPERSENSITIVE 1 [Arabidopsis thaliana] gb|AED93202.1| dual specificity protein phosphatase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dual specificity protein phosphatase family protein 0.0
Internal
sp_v2.0_unigene28467 SustainPine v2.0 1898
AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
Complete
sp_v2.0_unigene29676 SustainPine v2.0 501
AutoFact: Os08g0323600 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q6Z0E3_ORYSJ 2.0e-12
FL-Next: tr=Putative endoribonuclease E; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: rnase e g-like protein 1.08465e-13
Internal
sp_v2.0_unigene35016 SustainPine v2.0 293
AutoFact: Translation factor sui1, putative n=1 Tax=Ricinus communis RepID=B9RA65_RICCO 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: apo protein 3 1.39212e-16
Internal
sp_v2.0_unigene36496 SustainPine v2.0 867
AutoFact: Protein translocase subunit secA, chloroplastic n=1 Tax=Spinacia oleracea RepID=SECA_SPIOL 0.0
FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Spinacia oleracea (Spinach). 0.0
Blast2go: protein translocase subunit chloroplastic-like 0.0
Internal
sp_v2.0_unigene37591 SustainPine v2.0 479
AutoFact: Protein translocase subunit secA n=1 Tax=Ricinus communis RepID=B9RN40_RICCO 0.0
FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein translocase subunit chloroplastic-like 0.0
Internal
sp_v2.0_unigene39071 SustainPine v2.0 556
AutoFact: Os05g0315100 protein n=2 Tax=Oryza sativa RepID=Q0DJ89_ORYSJ 7.9874e-44
FL-Next: sp=Pentatricopeptide repeat-containing protein At5g67570, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 0.0
Internal
sp_v2.0_unigene39997 SustainPine v2.0 308
AutoFact: Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] gb|AAG51125.1|AC069144_22 hypothetical protein [Arabidopsis thaliana] gb|AEE33177.1| Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] 3.0e-18
FL-Next: sp=Zinc finger protein VAR3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger protein chloroplastic-like 4.14011e-18
Internal
sp_v2.0_unigene41514 SustainPine v2.0 330
AutoFact: PREDICTED: similar to Protein translocase subunit secA, chloroplastic n=1 Tax=Vitis vinifera RepID=UPI0001983A2B 9.99995e-41
FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein translocase subunit chloroplastic-like 0.0
Internal
sp_v2.0_unigene44165 SustainPine v2.0 412
AutoFact: ribonuclease II-like protein [Arabidopsis thaliana] 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: exoribonuclease ii 9.45572e-33
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain