Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: chloroplast organization

Term: GO:0009658  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene6233 SustainPine v2.0 2300
AutoFact: Peptidase M50 family protein [Arabidopsis thaliana] gb|AAK92744.1| unknown protein [Arabidopsis thaliana] gb|AAN71977.1| unknown protein [Arabidopsis thaliana] gb|AED93947.1| Peptidase M50 family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene6466 SustainPine v2.0 1551
AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=D5A7Z0_PICSI 0.0
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent clp protease proteolytic subunit 0.0
Complete
sp_v2.0_unigene7421 SustainPine v2.0 768
AutoFact: ATP-binding cassette transporter, subfamily B, member 10, group ATM protein PpABCB10 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TV53_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter-like protein 0.0
C-terminus
sp_v2.0_unigene7734 SustainPine v2.0 1860
AutoFact: Iron-sulfur cluster assembly protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8IR30_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at4g01940 t7b11_20 0.0
Complete
sp_v2.0_unigene8341 SustainPine v2.0 1588
AutoFact: protein disulfide isomerase [Arabidopsis thaliana] gb|AAL24407.1| Unknown protein [Arabidopsis thaliana] gb|AAM10168.1| unknown protein [Arabidopsis thaliana] gb|ABY91282.1| snowy cotyledon 2 [Arabidopsis thaliana] gb|AEE76210.1| protein disulfide isomera 2.0e-37
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene8357 SustainPine v2.0 2605
AutoFact: RecName: Full=Protein TOC75, chloroplastic; AltName: Full=75 kDa chloroplast outer envelope protein; AltName: Full=75 kDa translocon at the outer-envelope membrane of chloroplasts; AltName: Full=Import intermediate-associated protein of 75 kDa; Flags: Pre 0.0
FL-Next: sp=Protein TOC75-3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene8516 SustainPine v2.0 3153
AutoFact: Ribonucleoside-diphosphate reductase n=1 Tax=Musa acuminata RepID=Q6RZW3_MUSAC 0.0
FL-Next: sp=Ribonucleoside-diphosphate reductase large subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribonucleoside-diphosphate reductase large subunit 0.0
Complete
sp_v2.0_unigene8799 SustainPine v2.0 963
AutoFact: WS02718.B21_L19 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02718_L19 5, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dual specificity protein phosphatase family protein 0.0
Putative N-terminus
sp_v2.0_unigene9019 SustainPine v2.0 3713
AutoFact: chloroplast inner envelope protein, 110 kD (IEP110) [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene9584 SustainPine v2.0 907
AutoFact: Unassigned protein
FL-Next: sp=Pentatricopeptide repeat-containing protein At5g67570, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 4.78876e-28
Putative C-terminus
sp_v2.0_unigene11047 SustainPine v2.0 385
AutoFact: Transporter ATM1, mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9T3V9_RICCO 1.0e-32
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member mitochondrial-like 4.25317e-39
C-terminus
sp_v2.0_unigene12252 SustainPine v2.0 1390
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SJG4_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family of the mitochondria family 0.0
Putative N-terminus
sp_v2.0_unigene12967 SustainPine v2.0 1533
AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9NTE8_PICSI 0.0
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent clp protease proteolytic subunit 0.0
Complete
sp_v2.0_unigene13344 SustainPine v2.0 1952
AutoFact: Glutamyl-tRNA synthetase 1, 2, putative n=1 Tax=Ricinus communis RepID=B9T2L7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutamyl-trna synthetase 0.0
Complete
sp_v2.0_unigene13426 SustainPine v2.0 1523
AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Flags: Precursor gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
Complete
sp_v2.0_unigene14988 SustainPine v2.0 622
AutoFact: RNAse E/G-like protein n=8 Tax=Arabidopsis RepID=F4IV66_ARATH 2.0e-39
FL-Next: tr=At2g04270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rnase e g-like protein 5.60519e-45
C-terminus
sp_v2.0_unigene15554 SustainPine v2.0 1720
AutoFact: Triosephosphate isomerase n=2 Tax=Picea sitchensis RepID=A9NUV2_PICSI 0.0
FL-Next: sp=Triosephosphate isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: triosephosphate isomerase 0.0
Complete
sp_v2.0_unigene16873 SustainPine v2.0 1459
AutoFact: RNA binding protein [Arabidopsis thaliana] gb|AAF21211.1|AC013483_35 unknown protein [Arabidopsis thaliana] gb|AAL61923.1| unknown protein [Arabidopsis thaliana] gb|AAN65055.1| unknown protein [Arabidopsis thaliana] gb|AEE74630.1| RNA binding protein [Ara 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene16904 SustainPine v2.0 2696
AutoFact: RuBisCO large subunit-binding protein subunit alpha, chloroplastic n=9 Tax=fabids RepID=RUBA_PEA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ru large subunit-binding protein subunit chloroplastic-like 0.0
Complete
sp_v2.0_unigene16922 SustainPine v2.0 1113
AutoFact: pfam01106, NifU, NifU-like domain 6.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nitrogen fixation protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain