Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: ATP-dependent RNA helicase activity

Term: GO:0004004  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1571 SustainPine v2.0 2603
AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [Arabidopsis thaliana] emb|CAB82945.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAM53340.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAQ56774 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna-splicing factor atp-dependent rna helicase 0.0
Putative N-terminus
sp_v2.0_unigene2401 SustainPine v2.0 2539
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like 0.0
Putative Complete
sp_v2.0_unigene2629 SustainPine v2.0 1312
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like 3.90336e-34
Putative C-terminus
sp_v2.0_unigene4163 SustainPine v2.0 1124
AutoFact: ATP-dependent RNA and DNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SEF1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: atp-dependent rna helicase mitochondrial-like 0.0
Putative C-terminus
sp_v2.0_unigene4239 SustainPine v2.0 2470
AutoFact: DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana] sp|Q9SQV1.1|RH40_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 40 gb|AAF08584.1|AC011623_17 putative RNA helicase [Arabidopsis thaliana] gb|AEE74400.1| DEAD-box ATP-dependent RNA heli 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 14 0.0
C-terminus
sp_v2.0_unigene10964 SustainPine v2.0 1026
AutoFact: putative RNA helicase [Oryza sativa Japonica Group] 1.0e-32
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like 1.19185e-40
N-terminus
sp_v2.0_unigene11187 SustainPine v2.0 1085
AutoFact: ATP-dependent RNA and DNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SEF1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: atp-dependent rna helicase mitochondrial-like 0.0
Internal
sp_v2.0_unigene23423 SustainPine v2.0 1290
AutoFact: DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana] sp|Q9SQV1.1|RH40_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 40 gb|AAF08584.1|AC011623_17 putative RNA helicase [Arabidopsis thaliana] gb|AEE74400.1| DEAD-box ATP-dependent RNA heli 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 14 0.0
Putative C-terminus
sp_v2.0_unigene41175 SustainPine v2.0 433
AutoFact: ATP-dependent RNA and DNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RTM6_RICCO 2.0e-36
FL-Next: tr=ATP-dependent RNA and DNA helicase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: atp-dependent rna helicase mitochondrial-like 1.21212e-42
Internal
sp_v2.0_unigene42502 SustainPine v2.0 259
AutoFact: putative mitochondrial RNA helicase [Oryza sativa Japonica Group] 6.0e-20
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: atp-dependent rna helicase mitochondrial-like 3.70801e-27
Internal
sp_v2.0_unigene45955 SustainPine v2.0 611
AutoFact: ATP-dependent RNA and DNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RTM6_RICCO 0.0
FL-Next: tr=ATP-dependent RNA and DNA helicase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain