Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: probable pre-mrna-splicing factor atp-dependent rna helicase-like

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene2401 SustainPine v2.0 2539
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like 0.0
Putative Complete
sp_v2.0_unigene2629 SustainPine v2.0 1312
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like 3.90336e-34
Putative C-terminus
sp_v2.0_unigene10964 SustainPine v2.0 1026
• AutoFact: putative RNA helicase [Oryza sativa Japonica Group] 1.0e-32
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like 1.19185e-40
N-terminus
sp_v2.0_unigene26729 SustainPine v2.0 901
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like 0.0
Putative C-terminus
sp_v2.0_unigene33834 SustainPine v2.0 479
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like 0.0
N-terminus
sp_v2.0_unigene36189 SustainPine v2.0 629
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_56.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TKY5_VITVI 3.0e-31
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like 1.22473e-38
N-terminus
sp_v2.0_unigene38362 SustainPine v2.0 374
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 5.0e-40
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain