Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: RNA metabolic process

Term: GO:0016070  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene41175 SustainPine v2.0 433
AutoFact: ATP-dependent RNA and DNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RTM6_RICCO 2.0e-36
FL-Next: tr=ATP-dependent RNA and DNA helicase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: atp-dependent rna helicase mitochondrial-like 1.21212e-42
Internal
sp_v2.0_unigene42250 SustainPine v2.0 510
AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Vitis vinifera RepID=D7UBN7_VITVI 3.0e-11
FL-Next: sp=DNA-directed RNA polymerase E subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase iv largest subunit 1.73147e-13
Internal
sp_v2.0_unigene42502 SustainPine v2.0 259
AutoFact: putative mitochondrial RNA helicase [Oryza sativa Japonica Group] 6.0e-20
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: atp-dependent rna helicase mitochondrial-like 3.70801e-27
Internal
sp_v2.0_unigene45955 SustainPine v2.0 611
AutoFact: ATP-dependent RNA and DNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RTM6_RICCO 0.0
FL-Next: tr=ATP-dependent RNA and DNA helicase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v2.0_unigene48982 SustainPine v2.0 399
AutoFact: S-adenosylmethionine-dependent methyltransferase domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=F4HRC0_ARATH 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: s-adenosyl-l-methionine-dependent methyltransferase domain-containing protein 1.33866e-41
C-terminus
sp_v2.0_unigene68319 SustainPine v2.0 313
AutoFact: putative tRNA synthase [Oryza sativa] 2.0e-20
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: trna pseudouridine synthase b 7.68762e-28
C-terminus
sp_v2.0_unigene74436 SustainPine v2.0 256
AutoFact: PREDICTED: ubiquitin A-52 residue ribosomal protein fusion product 1 n=1 Tax=Rattus norvegicus RepID=UPI0001CF4A0F 9.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin 2.11893e-13
Putative C-terminus
sp_v2.0_unigene74647 SustainPine v2.0 139
AutoFact: Ubiquitin n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CCU3_9EUKA 7.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cnpv096 ubiquitin 8.84226e-19
Internal
sp_v2.0_unigene83943 SustainPine v2.0 316
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: related to ubi4-ubiquitin 4.14682e-18
N-terminus
sp_v2.0_unigene90991 SustainPine v2.0 666
AutoFact: Cyclic phosphodiesterase, putative n=1 Tax=Ricinus communis RepID=B9S8G6_RICCO 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclic phosphodiesterase 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain