Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: thylakoid membrane organization

Term: GO:0010027  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene17420 SustainPine v2.0 1180
AutoFact: Inner membrane protein PPF-1, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SZE3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inner membrane protein 0.0
N-terminus
sp_v2.0_unigene18055 SustainPine v2.0 2437
AutoFact: chloroplast processing peptidase [Arabidopsis thaliana] sp|Q8H0W1.2|PLSP1_ARATH RecName: Full=Chloroplast processing peptidase; AltName: Full=Signal peptidase I-3; Flags: Precursor gb|AAU05529.1| At1g05140 [Arabidopsis thaliana] gb|AEE76927.1| chloroplast 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene20990 SustainPine v2.0 1160
AutoFact: Inner membrane protein ALBINO3, chloroplastic n=4 Tax=Arabidopsis RepID=ALB3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inner membrane protein albino3 0.0
Putative N-terminus
sp_v2.0_unigene21572 SustainPine v2.0 1135
AutoFact: chloroplast processing peptidase [Arabidopsis thaliana] sp|Q8H0W1.2|PLSP1_ARATH RecName: Full=Chloroplast processing peptidase; AltName: Full=Signal peptidase I-3; Flags: Precursor gb|AAU05529.1| At1g05140 [Arabidopsis thaliana] gb|AEE76927.1| chloroplast 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene29309 SustainPine v2.0 539
AutoFact: chloroplast srp54 receptor1 [Zea mays] emb|CAD70570.1| chloroplast SRP receptor cpFtsY precursor [Zea mays] gb|ACR34281.1| unknown [Zea mays] 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: signal recognition 54 kda protein 3.93765e-43
Putative Complete
sp_v2.0_unigene36385 SustainPine v2.0 851
AutoFact: Nitric oxide synthase (Fragment) n=2 Tax=Solanaceae RepID=Q157N0_TOBAC 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nitric oxide synthase 3.6941e-41
N-terminus
sp_v2.0_unigene43904 SustainPine v2.0 216
AutoFact: Cycloartenol synthase n=2 Tax=Pinaceae RepID=Q9FQM1_ABIMA 5.0e-24
FL-Next: tr=Cycloartenol synthase; Abies magnifica (Red fir). 0.0
Blast2go: cycloartenol synthase 1.41795e-28
Internal
sp_v2.0_unigene63630 SustainPine v2.0 338
AutoFact: chloroplast processing peptidase [Arabidopsis thaliana] sp|Q8H0W1.2|PLSP1_ARATH RecName: Full=Chloroplast processing peptidase; AltName: Full=Signal peptidase I-3; Flags: Precursor gb|AAU05529.1| At1g05140 [Arabidopsis thaliana] gb|AEE76927.1| chloroplast 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.83075e-39
Internal
sp_v2.0_unigene65958 SustainPine v2.0 358
AutoFact: GTP1/OBG family protein [Arabidopsis thaliana] gb|AAM91598.1| GTP-binding protein obg-like [Arabidopsis thaliana] gb|AAP37780.1| At5g18570 [Arabidopsis thaliana] gb|AED92580.1| GTP1/OBG family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp1 obg family protein 0.0
Internal
sp_v2.0_unigene69386 SustainPine v2.0 394
AutoFact: chloroplast srp54 receptor1 [Zea mays] emb|CAD70570.1| chloroplast SRP receptor cpFtsY precursor [Zea mays] gb|ACR34281.1| unknown [Zea mays] 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v2.0_unigene74669 SustainPine v2.0 399
AutoFact: [I] COG3675 Predicted lipase 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lipase class 3 family protein 0.0
Internal
sp_v2.0_unigene75084 SustainPine v2.0 405
AutoFact: Sec-independent periplasmic protein translocase [Arabidopsis thaliana] gb|AAD33946.1|AF145045_1 TATC [Arabidopsis thaliana] gb|AAK25882.1|AF360172_1 putative TATC protein [Arabidopsis thaliana] dbj|BAB62074.1| cpTatC [Arabidopsis thaliana] gb|AAL07196.1| 6.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sec-independent protein translocase protein 6.54623e-34
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain