Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: helicase activity

Term: GO:0004386  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene11399 SustainPine v2.0 441
• AutoFact: Os07g0681600 protein n=3 Tax=Oryza sativa RepID=Q7XHW1_ORYSJ 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Blast2go: werner syndrome atp-dependent helicase-like 3.73771e-11
C-terminus
sp_v2.0_unigene11617 SustainPine v2.0 759
• AutoFact: Chromatin remodelling complex ATPase chain isw-1, putative n=1 Tax=Ricinus communis RepID=B9S022_RICCO 8.0e-30
• FL-Next: tr=Chromatin remodelling complex ATPase chain isw-1, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: chromatin remodelling complex atpase chain isw- 3.6255e-33
C-terminus
sp_v2.0_unigene12191 SustainPine v2.0 973
• AutoFact: DUF3535 domain containing protein 0.0001
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: tata box binding protein associated factor-like protein 0.0
Internal
sp_v2.0_unigene12542 SustainPine v2.0 637
• AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2Y8_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: swr1 complex snf2 family dna-dependent atpase 0.0
Putative C-terminus
sp_v2.0_unigene13536 SustainPine v2.0 456
• AutoFact: chromatin remodeling factor18 [Arabidopsis thaliana] gb|AEE32273.1| chromatin remodeling factor18 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: chromatin remodelling complex atpase chain isw- 0.0
Internal
sp_v2.0_unigene13819 SustainPine v2.0 812
• AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9GWX1_POPTR 0.0
• FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: f-box protein at3g54460-like 0.0
Internal
sp_v2.0_unigene14484 SustainPine v2.0 1812
• AutoFact: Desaturase delta 9 n=2 Tax=Picea RepID=Q8S4Q3_PICGL 0.0
• FL-Next: sp=Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene20102 SustainPine v2.0 714
• AutoFact: putative pre-mRNA-splicing factor ATP-dependent RNA helicase [Arabidopsis thaliana] sp|O22899.1|DHX15_ARATH RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase gb|AAB63825.1| putative pre-mRNA splicing factor RNA helicase [Arabidops 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pre-mrna-splicing factor atp-dependent rna helicase 0.0
Putative N-terminus
sp_v2.0_unigene22917 SustainPine v2.0 469
• AutoFact: putative pre-mRNA-splicing factor ATP-dependent RNA helicase [Arabidopsis thaliana] sp|O22899.1|DHX15_ARATH RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase gb|AAB63825.1| putative pre-mRNA splicing factor RNA helicase [Arabidops 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pre-mrna-splicing factor atp-dependent rna helicase 3.36312e-44
Internal
sp_v2.0_unigene27095 SustainPine v2.0 1443
• AutoFact: pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pre-mrna-splicing factor atp-dependent rna helicase prp16-like 0.0
Complete
sp_v2.0_unigene28011 SustainPine v2.0 2251
• AutoFact: putative pre-mRNA-splicing factor ATP-dependent RNA helicase [Arabidopsis thaliana] sp|O22899.1|DHX15_ARATH RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase gb|AAB63825.1| putative pre-mRNA splicing factor RNA helicase [Arabidops 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene32372 SustainPine v2.0 321
• AutoFact: Dicer-like protein n=1 Tax=Populus trichocarpa RepID=B9GRS6_POPTR 0.0
• FL-Next: sp=Endoribonuclease Dicer homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: endoribonuclease dicer 0.0
Internal
sp_v2.0_unigene33834 SustainPine v2.0 479
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like 0.0
N-terminus
sp_v2.0_unigene36663 SustainPine v2.0 501
• AutoFact: pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pre-mrna-splicing factor atp-dependent rna helicase prp16-like 0.0
Internal
sp_v2.0_unigene44212 SustainPine v2.0 196
• AutoFact: RNA helicase-like [Oryza sativa Japonica Group] 4.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pre-mrna-splicing factor atp-dependent rna helicase dhx16 8.65231e-32
Internal
sp_v2.0_unigene45880 SustainPine v2.0 317
• AutoFact: ATP-dependent RNA helicase, putative n=3 Tax=Arabidopsis thaliana RepID=Q9C7G2_ARATH 8.99998e-41
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: atp-dependent rna 1.32927e-41
Internal
sp_v2.0_unigene58508 SustainPine v2.0 406
• AutoFact: RNA helicase - like protein [Arabidopsis thaliana] emb|CAB78848.1| RNA helicase-like protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
sp_v2.0_unigene59449 SustainPine v2.0 1305
• AutoFact: PREDICTED: similar to EMB2733/ESP3 (EMBRYO DEFECTIVE 2733); ATP-dependent RNA helicase n=1 Tax=Vitis vinifera RepID=UPI00019851EB 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pre-mrna-splicing factor atp-dependent rna helicase dhx16 0.0
Internal
sp_v2.0_unigene67480 SustainPine v2.0 323
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RMI9_RICCO 6.0e-39
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: atp-dependent rna 1.28505e-38
Internal
sp_v2.0_unigene67703 SustainPine v2.0 457
• AutoFact: RECQ helicase SIM [Arabidopsis thaliana] sp|Q9FT69.1|RQSIM_ARATH RecName: Full=ATP-dependent DNA helicase Q-like SIM; AltName: Full=RecQ-like protein SIM; Short=AtRecQsim; Short=Similar to RecQ protein emb|CAC14870.1| DNA Helicase [Arabidopsis thaliana] g 2.0e-07
• FL-Next: sp=ATP-dependent DNA helicase Q-like SIM; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: atp-dependent dna helicase q-like sim-like 1.829e-16
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain