Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: chromatin

Term: GO:0000785  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene533 SustainPine v2.0 2078
AutoFact: Histone acetyltransferase n=5 Tax=rosids RepID=B9H794_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
Complete
sp_v2.0_unigene1137 SustainPine v2.0 1029
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: structural maintenance of chromosomes protein 3-like 0.0
N-terminus
sp_v2.0_unigene1633 SustainPine v2.0 2015
AutoFact: RNA recognition motif-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SU08_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 0.0
N-terminus
sp_v2.0_unigene3235 SustainPine v2.0 2847
AutoFact: Putative methyl-binding domain protein n=1 Tax=Cryptomeria japonica RepID=Q1XG62_CRYJA 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyl-binding domain protein 0.0
Complete
sp_v2.0_unigene3950 SustainPine v2.0 537
AutoFact: Nuclear fusion defective 4 protein n=3 Tax=Arabidopsis RepID=F4I9E1_ARATH 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: major facilitator protein 1.8657e-14
N-terminus
sp_v2.0_unigene4299 SustainPine v2.0 1719
AutoFact: FCA gamma [Brassica napus] 1.0e-11
FL-Next: Isoform Alpha of Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA 0.0
Blast2go: flowering time control protein 1.37341e-12
Putative C-terminus
sp_v2.0_unigene4432 SustainPine v2.0 1260
AutoFact: Flowering time control protein-like protein (Fragment) n=1 Tax=Picea sitchensis RepID=E0ZL31_PICSI 7.0e-11
FL-Next: Isoform Alpha of Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA 0.0
Blast2go: flowering time control protein 2.21199e-12
C-terminus
sp_v2.0_unigene5247 SustainPine v2.0 569
AutoFact: CHD3-type chromatin-remodeling factor PICKLE [Arabidopsis thaliana] sp|Q9S775.1|PKL_ARATH RecName: Full=CHD3-type chromatin-remodeling factor PICKLE; AltName: Full=Protein GYMNOS gb|AAF07084.1|AF185578_1 GYMNOS/PICKLE [Arabidopsis thaliana] gb|AAF13875.1| 0.0
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
sp_v2.0_unigene8865 SustainPine v2.0 722
AutoFact: SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TTS1_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromodomain-helicase-dna-binding protein 2-like 0.0
Putative N-terminus
sp_v2.0_unigene8873 SustainPine v2.0 2844
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAF79432.1|AC025808_14 F18O14.27 [Arabidopsis thaliana] gb|AEE29863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Complete
sp_v2.0_unigene10364 SustainPine v2.0 815
AutoFact: human Mi-2 autoantigen-like protein [Arabidopsis thaliana] dbj|BAB08833.1| helicase-like protein [Arabidopsis thaliana] 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 3.53322e-32
Putative N-terminus
sp_v2.0_unigene11000 SustainPine v2.0 880
AutoFact: FCA gamma [Pisum sativum] 1.0e-17
FL-Next: Isoform Beta of Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA 0.0
Blast2go: flowering time control protein fca-like 1.49858e-21
N-terminus
sp_v2.0_unigene12263 SustainPine v2.0 698
AutoFact: Major facilitator protein n=3 Tax=Arabidopsis RepID=Q8H132_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: major facilitator protein 0.0
N-terminus
sp_v2.0_unigene12722 SustainPine v2.0 2020
AutoFact: Histone acetyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJM4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
Putative Complete
sp_v2.0_unigene21285 SustainPine v2.0 1844
AutoFact: pfam00385, Chromo, Chromodomain 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: terminal flower 2 protein 0.0
Complete
sp_v2.0_unigene65006 SustainPine v2.0 342
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 5.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 8.03753e-21
Putative N-terminus
sp_v2.0_unigene82614 SustainPine v2.0 861
AutoFact: DNA-binding protein MNB1B, putative n=1 Tax=Ricinus communis RepID=B9SQ35_RICCO 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group b2 protein 0.0
Complete
sp_v2.0_unigene82713 SustainPine v2.0 1126
AutoFact: DNA-binding protein MNB1B, putative n=1 Tax=Ricinus communis RepID=B9SQ35_RICCO 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group b2 protein 8.71655e-36
Putative Complete
sp_v2.0_unigene83028 SustainPine v2.0 523
AutoFact: DNA-binding protein MNB1B, putative n=1 Tax=Ricinus communis RepID=B9SQ35_RICCO 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group protein b1 3.01313e-20
N-terminus
sp_v2.0_unigene83377 SustainPine v2.0 491
AutoFact: High mobility group box 1 protein n=1 Tax=Gossypium hirsutum RepID=E3UKG6_GOSHI 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 3.19763e-35
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain