Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: tRNA processing

Term: GO:0008033  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene86 SustainPine v2.0 857
AutoFact: N2,N2-dimethylguanosine tRNA methyltransferase [Arabidopsis thaliana] emb|CAB87432.1| N2, N2-dimethylguanosine tRNA methyltransferases-like protein [Arabidopsis thaliana] gb|AEE79510.1| N2,N2-dimethylguanosine tRNA methyltransferase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene630 SustainPine v2.0 2785
AutoFact: Probable N(2),N(2)-dimethylguanosine tRNA methyltransferase 1 n=3 Tax=Arabidopsis RepID=TRM1_ARATH 0.0
FL-Next: sp=Probable N(2),N(2)-dimethylguanosine tRNA methyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable n -dimethylguanosine trna methyltransferase 1-like 0.0
Complete
sp_v2.0_unigene856 SustainPine v2.0 1709
AutoFact: glycoprotease M22 family protein [Arabidopsis thaliana] ref|NP_974593.1| glycoprotease M22 family protein [Arabidopsis thaliana] emb|CAA16557.1| glycoprotein endopeptidase - like protein [Arabidopsis thaliana] emb|CAB79227.1| glycoprotein endopeptidase-li 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycoprotease m22 family protein 0.0
Complete
sp_v2.0_unigene862 SustainPine v2.0 1202
AutoFact: RNase_P_Rpp14 domain containing protein 8.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
Complete
sp_v2.0_unigene1138 SustainPine v2.0 1871
AutoFact: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RIE1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase 0.0
Complete
sp_v2.0_unigene1624 SustainPine v2.0 2021
AutoFact: phenylalanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q94K73.1|SYFM_ARATH RecName: Full=Phenylalanyl-tRNA synthetase, chloroplastic/mitochondrial; AltName: Full=Phenylalanine--tRNA ligase; Short=PheRS; Flags: Precursor gb|AAK44062.1|AF370247_1 putative p 0.0
FL-Next: sp=Phenylalanyl-tRNA synthetase, chloroplastic/mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phenylalanyl-trna chloroplastic mitochondrial-like 0.0
Complete
sp_v2.0_unigene1734 SustainPine v2.0 2020
AutoFact: proteinaceous RNase P 1 [Arabidopsis thaliana] sp|Q66GI4.1|PP179_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32230, mitochondrial; Flags: Precursor gb|AAU05541.1| At2g32230 [Arabidopsis thaliana] gb|AEC08652.1| proteinaceous RNase 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At2g32230, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
sp_v2.0_unigene2273 SustainPine v2.0 814
AutoFact: tRNA-dihydrouridine synthase 3-like n=3 Tax=Arabidopsis RepID=DUS3L_ARATH 0.0
FL-Next: sp=tRNA-dihydrouridine synthase 3-like; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: trna-dihydrouridine synthase 3-like protein 0.0
C-terminus
sp_v2.0_unigene2545 SustainPine v2.0 2157
AutoFact: geranylgeranyl hydrogenase [Glycine max] 0.0
FL-Next: sp=Geranylgeranyl diphosphate reductase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: geranylgeranyl reductase 0.0
Complete
sp_v2.0_unigene2801 SustainPine v2.0 1182
AutoFact: Multidrug resistance pump, putative n=1 Tax=Ricinus communis RepID=B9SJ92_RICCO 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At2g32230, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein mitochondrial-like 0.0
Internal
sp_v2.0_unigene3937 SustainPine v2.0 2133
AutoFact: Fruit protein PKIWI502, putative n=1 Tax=Ricinus communis RepID=B9T1V7_RICCO 0.0
FL-Next: sp=Fruit protein pKIWI502; Actinidia deliciosa (Kiwi). 0.0
Blast2go: fruit protein pkiwi502 0.0
Complete
sp_v2.0_unigene4780 SustainPine v2.0 1308
AutoFact: tRNA dimethylallyltransferase 2 [Arabidopsis thaliana] sp|Q9ZUX7.2|IPT2_ARATH RecName: Full=tRNA dimethylallyltransferase 2; AltName: Full=Isopentenyl-diphosphate: tRNA isopentenyltransferase 2; Short=AtIPT2; Short=IPP transferase 2; Short=IPPT 2 gb|AAF00 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna isopentenyltransferase 0.0
N-terminus
sp_v2.0_unigene5390 SustainPine v2.0 1008
AutoFact: Poly(A) polymerase, putative n=1 Tax=Ricinus communis RepID=B9T6L0_RICCO 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: polynucleotide adenylyltransferase-like protein 5.56459e-15
C-terminus
sp_v2.0_unigene5540 SustainPine v2.0 814
AutoFact: tRNA-dihydrouridine synthase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SVS8_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: trna-dihydrouridine synthase 1-like 0.0
N-terminus
sp_v2.0_unigene5598 SustainPine v2.0 1959
AutoFact: tRNA pseudouridine synthase family protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCD2_CUCME 0.0
FL-Next: sp=Putative tRNA pseudouridine synthase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: trna pseudouridine synthase 0.0
C-terminus
sp_v2.0_unigene6444 SustainPine v2.0 1869
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SE49_RICCO 0.0
FL-Next: sp=tRNA dimethylallyltransferase 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: trna dimethylallyltransferase 9 0.0
Complete
sp_v2.0_unigene7663 SustainPine v2.0 1554
AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AA47_PICSI 0.0
FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna pseudouridine synthase a-like 0.0
Putative Complete
sp_v2.0_unigene8095 SustainPine v2.0 921
AutoFact: putative ribonuclease P/MRP protein subunit POP5 [Arabidopsis thaliana] sp|Q6AWV1.1|POP5_ARATH RecName: Full=Probable ribonuclease P/MRP protein subunit POP5; AltName: Full=Protein EMBRYO DEFECTIVE 1687 gb|AAT85743.1| At1g04635 [Arabidopsis thaliana] gb|A 9.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene8402 SustainPine v2.0 2365
AutoFact: putative GMP synthase [Arabidopsis thaliana] 0.0
FL-Next: sp=Anthranilate synthase component II; Porphyra purpurea. Plastid; Chloroplast. 0.0
Blast2go: gmp synthase 0.0
Complete
sp_v2.0_unigene9132 SustainPine v2.0 722
AutoFact: tRNA-dihydrouridine synthase n=1 Tax=Ricinus communis RepID=B9SSD6_RICCO 0.0
FL-Next: sp=tRNA-dihydrouridine synthase 3-like; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: trna-dihydrouridine synthase 2 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain