Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: structural constituent of ribosome

Term: GO:0003735  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene10830 SustainPine v2.0 832
AutoFact: 30S ribosomal protein S13 [Arabidopsis thaliana] sp|P42732.1|RR13_ARATH RecName: Full=30S ribosomal protein S13, chloroplastic; AltName: Full=CS13; Flags: Precursor emb|CAA79013.1| chloroplast 30S ribosomal protein S13 [Arabidopsis thaliana] emb|CAA88028. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 30s ribosomal protein s13 0.0
Complete
sp_v2.0_unigene10863 SustainPine v2.0 1158
AutoFact: 40S ribosomal protein S12 n=4 Tax=Picea sitchensis RepID=A9NQ79_PICSI 0.0
FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s12 0.0
Complete
sp_v2.0_unigene11038 SustainPine v2.0 1418
AutoFact: Ribosomal protein L10 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene11256 SustainPine v2.0 1042
AutoFact: small subunit ribosomal protein S17 [Arabidopsis thaliana] gb|AAD43160.1|AC007504_15 Putative ribosomal protein [Arabidopsis thaliana] dbj|BAC42717.1| unknown protein [Arabidopsis thaliana] gb|AAO50680.1| putative 40S ribosomal protein S17 [Arabidopsis th 1.0e-33
FL-Next: sp=30S ribosomal protein S17, chloroplastic; Thalassiosira pseudonana (Marine diatom) (Cyclotella nana). Plastid; Chloroplast. 0.0
Blast2go: 30s ribosomal protein s17 2.8026e-45
Complete
sp_v2.0_unigene11483 SustainPine v2.0 1393
AutoFact: Ribosomal protein L9/RNase H1 [Arabidopsis thaliana] dbj|BAA97147.1| unnamed protein product [Arabidopsis thaliana] gb|AAO22701.1| unknown protein [Arabidopsis thaliana] gb|AAO42390.1| unknown protein [Arabidopsis thaliana] gb|AED96300.1| Ribosomal protei 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l9 0.0
Complete
sp_v2.0_unigene11494 SustainPine v2.0 3274
AutoFact: RecName: Full=Putative transcription elongation factor SPT5 homolog 1 emb|CAB52557.1| putative protein [Arabidopsis thaliana] emb|CAB77960.1| putative protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Putative transcription elongation factor SPT5 homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: global transcription factor group 0.0
C-terminus
sp_v2.0_unigene12205 SustainPine v2.0 1012
AutoFact: 50S ribosomal protein L35 n=1 Tax=Picea sitchensis RepID=A9NKM1_PICSI 0.0
FL-Next: sp=50S ribosomal protein L35; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein l35 0.0
Complete
sp_v2.0_unigene12400 SustainPine v2.0 828
AutoFact: ribosomal protein L16a [Coprinopsis cinerea okayama7#130] gb|EAU93058.1| ribosomal protein L16a [Coprinopsis cinerea okayama7#130] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l13a 0.0
Complete
sp_v2.0_unigene12612 SustainPine v2.0 530
AutoFact: 40S ribosomal protein S9 n=2 Tax=Rhizoctonia solani RepID=A5X2M3_THACU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s9 0.0
Putative C-terminus
sp_v2.0_unigene12629 SustainPine v2.0 409
AutoFact: Ribosomal L18p/L5e family protein [Arabidopsis thaliana] emb|CAB89317.1| putative protein [Arabidopsis thaliana] gb|AAT41747.1| At3g45020 [Arabidopsis thaliana] gb|AAT41833.1| At3g45020 [Arabidopsis thaliana] dbj|BAD95207.1| hypothetical protein [Arabidop 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal l18p l5e family protein 8.05076e-37
C-terminus
sp_v2.0_unigene12756 SustainPine v2.0 574
AutoFact: 60S ribosomal protein L28 n=4 Tax=Zea mays RepID=B6SQA2_MAIZE 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l28 3.07526e-12
Putative Complete
sp_v2.0_unigene12854 SustainPine v2.0 901
AutoFact: Ribosomal_S21 domain containing protein 9.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein s21 family protein 0.0
Complete
sp_v2.0_unigene12975 SustainPine v2.0 444
AutoFact: ribosomal protein S2 [Coprinopsis cinerea okayama7#130] gb|EAU91621.1| ribosomal protein S2 [Coprinopsis cinerea okayama7#130] 0.0
FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: 40s ribosomal protein s2 0.0
C-terminus
sp_v2.0_unigene13123 SustainPine v2.0 596
AutoFact: Ribosomal protein S7 n=1 Tax=Cycas taitungensis RepID=B0BLH1_CYCTA 0.0
FL-Next: sp=30S ribosomal protein S7, chloroplastic; Pinus koraiensis (Korean pine). Plastid; Chloroplast. 0.0
Blast2go: ribosomal protein s7 0.0
N-terminus
sp_v2.0_unigene13242 SustainPine v2.0 807
AutoFact: Ribosomal protein S3 n=8 Tax=Pinaceae RepID=D2DWK4_9CONI 1.0e-33
FL-Next: tr=Ribosomal protein S3; Abies holophylla (Neddle fir) (Manchurian fir). Mitochondrion. 0.0
Blast2go: ribosomal protein s3 8.04738e-41
Putative N-terminus
sp_v2.0_unigene13617 SustainPine v2.0 207
AutoFact: 40S ribosomal protein S15 n=4 Tax=Agaricomycetes RepID=A8N9R5_COPC7 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s15 1.78767e-32
Putative N-terminus
sp_v2.0_unigene13855 SustainPine v2.0 1456
AutoFact: 50S ribosomal protein L3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l3 0.0
Complete
sp_v2.0_unigene14124 SustainPine v2.0 1494
AutoFact: 60S acidic ribosomal protein P3-1 n=2 Tax=Arabidopsis RepID=RLA31_ARATH 8.0e-11
FL-Next: sp=60S acidic ribosomal protein P3-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 60s acidic ribosomal protein p3 2.61989e-27
Complete
sp_v2.0_unigene14136 SustainPine v2.0 336
AutoFact: Ribosomal protein rpl36a n=1 Tax=Arenicola marina RepID=A8UFM0_AREMA 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l44 0.0
Putative Complete
sp_v2.0_unigene14240 SustainPine v2.0 1089
AutoFact: 50S ribosomal protein L19-1 [Arabidopsis thaliana] sp|Q8W463.1|RK191_ARATH RecName: Full=50S ribosomal protein L19-1, chloroplastic; Flags: Precursor gb|AAL32899.1| Unknown protein [Arabidopsis thaliana] gb|AAM10187.1| unknown protein [Arabidopsis thalian 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l19 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain