Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nucleoplasm

Term: GO:0005654  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1025 SustainPine v2.0 1772
AutoFact: protein ZEU1 (ZEUS1) [Arabidopsis thaliana] gb|AED97190.1| protein ZEU1 (ZEUS1) [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thymidylate kinase 0.0
Complete
sp_v2.0_unigene3732 SustainPine v2.0 1570
AutoFact: asymmetric leaves 2 [Carica papaya] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lob domain-containing protein 6 0.0
Complete
sp_v2.0_unigene3814 SustainPine v2.0 379
AutoFact: MAP7 multi-domain protein 2.0e-06
FL-Next: sp=Putative nuclear matrix constituent protein 1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: branched-chain-amino-acid aminotransferase 5 1.35097e-25
Internal
sp_v2.0_unigene4388 SustainPine v2.0 565
AutoFact: splicing factor 3B subunit 3 [Arabidopsis thaliana] ref|NP_567016.1| putative splicing factor [Arabidopsis thaliana] emb|CAB75754.1| spliceosomal-like protein [Arabidopsis thaliana] emb|CAB75756.1| spliceosomal-like protein [Arabidopsis thaliana] gb|AEE79 5.60519e-45
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene6328 SustainPine v2.0 1129
AutoFact: partner of Y14-mago [Arabidopsis thaliana] ref|NP_849639.1| partner of Y14-mago [Arabidopsis thaliana] ref|NP_001031023.1| partner of Y14-mago [Arabidopsis thaliana] gb|AAF16626.1|AC011661_4 T23J18.7 [Arabidopsis thaliana] gb|AAO42233.1| unknown protein [ 9.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: partner of y14-mago 0.0
Complete
sp_v2.0_unigene7237 SustainPine v2.0 1375
AutoFact: Asymmetric leaves 2 n=1 Tax=Carica papaya RepID=A7L4B2_CARPA 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene7321 SustainPine v2.0 1716
AutoFact: La protein 1 [Arabidopsis thaliana] gb|AAL07086.1| unknown protein [Arabidopsis thaliana] gb|AEE86109.1| La protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: la protein 1 0.0
Complete
sp_v2.0_unigene7690 SustainPine v2.0 458
AutoFact: [O] COG5272 Ubiquitin 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin 8.16695e-14
Putative Complete
sp_v2.0_unigene9307 SustainPine v2.0 2420
AutoFact: actin-related protein 5 [Arabidopsis thaliana] sp|Q940Z2.2|ARP5_ARATH RecName: Full=Actin-related protein 5 dbj|BAB03145.1| actin-like protein [Arabidopsis thaliana] gb|ACV53017.1| actin-related protein 5 [Arabidopsis thaliana] gb|ACV53018.1| actin-relate 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin-related protein 5 0.0
Complete
sp_v2.0_unigene11929 SustainPine v2.0 887
AutoFact: Umuc-like DNA repair protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E7T2_MICSR 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Chlorella variabilis. 0.0
Blast2go: dna polymerase iota 0.0
N-terminus
sp_v2.0_unigene13327 SustainPine v2.0 706
AutoFact: Histone H4 n=7 Tax=Neoptera RepID=E0VXR9_PEDHC 2.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene14951 SustainPine v2.0 992
AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin fusion protein 0.0
Complete
sp_v2.0_unigene17214 SustainPine v2.0 1225
AutoFact: Ubiquitin family protein n=3 Tax=Tetrahymena thermophila RepID=UPI00006CC966 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 0.0
Putative Complete
sp_v2.0_unigene18246 SustainPine v2.0 876
AutoFact: PREDICTED: similar to Late histone H2A.2.2 n=2 Tax=Hydra magnipapillata RepID=UPI0001924B8D 3.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene19251 SustainPine v2.0 889
AutoFact: Ataxia telangiectasia mutated, putative n=1 Tax=Ricinus communis RepID=B9RB21_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine-protein kinase atm 0.0
Putative Complete
sp_v2.0_unigene23506 SustainPine v2.0 667
AutoFact: histone H4 [Hyacinthus orientalis] 1.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene24276 SustainPine v2.0 1245
AutoFact: histone H4 [Hyacinthus orientalis] 4.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene24341 SustainPine v2.0 291
AutoFact: Histone H3 n=2 Tax=Pediculus humanus corporis RepID=E0V960_PEDHC 8.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h3 4.2039e-45
N-terminus
sp_v2.0_unigene24775 SustainPine v2.0 1077
AutoFact: Polyubiquitin 9 n=1 Tax=Arabidopsis thaliana RepID=UBQ9_ARATH 0.0
FL-Next: sp=Polyubiquitin 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin-like protein 0.0
Complete
sp_v2.0_unigene24780 SustainPine v2.0 751
AutoFact: Ubiquitin family protein n=3 Tax=Tetrahymena thermophila RepID=UPI00006CC966 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: ubiquitin family protein 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain