Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nucleoplasm

Term: GO:0005654  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene25695 SustainPine v2.0 1812
• AutoFact: Cell division cycle protein 14 (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8I465_CHLRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Blast2go: cdc14b protein 0.0
C-terminus
sp_v2.0_unigene26432 SustainPine v2.0 934
• AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin a-52 residue ribosomal protein fusion product 1 0.0
Complete
sp_v2.0_unigene28961 SustainPine v2.0 771
• AutoFact: PREDICTED: similar to germinal histone H4 gene n=1 Tax=Canis lupus familiaris RepID=UPI00005A582F 0.0
• FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h4 0.0
Putative Complete
sp_v2.0_unigene31402 SustainPine v2.0 729
• AutoFact: histone H4 [Hyacinthus orientalis] 2.0e-38
• FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene32341 SustainPine v2.0 572
• AutoFact: putative fanconi anemia, complementation group D2 [Oryza sativa Japonica Group] 6.0e-13
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Blast2go: low quality protein: fanconi anemia group d2 7.68529e-18
Putative N-terminus
sp_v2.0_unigene34246 SustainPine v2.0 610
• AutoFact: Filamin-A-interacting protein, putative n=1 Tax=Ricinus communis RepID=B9SX77_RICCO 6.0e-17
• FL-Next: sp=Putative nuclear matrix constituent protein 1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: branched-chain-amino-acid aminotransferase 5 1.46181e-18
Internal
sp_v2.0_unigene42069 SustainPine v2.0 487
• AutoFact: Splicing factor-like protein n=7 Tax=Embryophyta RepID=Q9T0I6_ARATH 0.0
• FL-Next: tr=Splicing factor-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: splicing factor-like protein 0.0
Internal
sp_v2.0_unigene44661 SustainPine v2.0 471
• AutoFact: Fanconi anemia group I protein isoform 1 [Homo sapiens] sp|Q9NVI1.4|FANCI_HUMAN RecName: Full=Fanconi anemia group I protein; Short=Protein FACI gb|ABQ63084.1| Fanconi anemia complementation group I [Homo sapiens] gb|AAI40770.1| FANCI protein [Homo sapien 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: fanconi anemia group i protein 2.92861e-34
Putative N-terminus
sp_v2.0_unigene49306 SustainPine v2.0 321
• AutoFact: Probable small nuclear ribonucleoprotein E n=1 Tax=Harpegnathos saltator RepID=E2B6Q5_9HYME 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: small nuclear ribonucleoprotein e 0.0
Putative Complete
sp_v2.0_unigene54732 SustainPine v2.0 401
• AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SKY7_PHYPA 3.0e-29
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: single-strand selective monofunctional uracil dna glycosylase 2.73164e-35
Internal
sp_v2.0_unigene58994 SustainPine v2.0 216
• AutoFact: ORF MSV144 putative ubiquitin, similar to Neurospora crassa GB:U01220 n=1 Tax=Melanoplus sanguinipes entomopoxvirus RepID=Q9YVU8_MSEPV 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin 2.89095e-09
N-terminus
sp_v2.0_unigene60416 SustainPine v2.0 590
• AutoFact: Calmodulin n=1 Tax=Actinidia arguta RepID=B1NDN0_9ERIC 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: calmodulin 1.01103e-29
Complete
sp_v2.0_unigene71979 SustainPine v2.0 387
• AutoFact: Polyubiquitin 9 n=1 Tax=Arabidopsis thaliana RepID=UBQ9_ARATH 4.0e-20
• FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
• Blast2go: ubiquitin 1.50703e-25
Complete
sp_v2.0_unigene74436 SustainPine v2.0 256
• AutoFact: PREDICTED: ubiquitin A-52 residue ribosomal protein fusion product 1 n=1 Tax=Rattus norvegicus RepID=UPI0001CF4A0F 9.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin 2.11893e-13
Putative C-terminus
sp_v2.0_unigene74647 SustainPine v2.0 139
• AutoFact: Ubiquitin n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CCU3_9EUKA 7.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cnpv096 ubiquitin 8.84226e-19
Internal
sp_v2.0_unigene76556 SustainPine v2.0 199
• AutoFact: PREDICTED: Fanconi anemia, complementation group D2 n=1 Tax=Taeniopygia guttata RepID=UPI000194D2AA 3.0e-17
• Blast2go: fanconi anemia group d2 protein 2.11479e-23
unknown
sp_v2.0_unigene77672 SustainPine v2.0 346
• AutoFact: Zinc ion binding protein n=3 Tax=Arabidopsis thaliana RepID=F4JXJ5_ARATH 6.0e-09
• FL-Next: tr=Putative uncharacterized protein At5g65740/MPA24_9; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: zinc ion binding protein 9.43674e-11
C-terminus
sp_v2.0_unigene79523 SustainPine v2.0 800
• AutoFact: Ubiquitin n=2 Tax=Dictyosteliida RepID=D3AVZ4_POLPA 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-like protein 3.02921e-31
Complete
sp_v2.0_unigene80361 SustainPine v2.0 383
• AutoFact: Polyubiquitin 9 n=1 Tax=Arabidopsis thaliana RepID=UBQ9_ARATH 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: polyubiquitin 9 8.75533e-30
C-terminus
sp_v2.0_unigene82590 SustainPine v2.0 676
• AutoFact: Histone H3 n=2 Tax=Pediculus humanus corporis RepID=E0V960_PEDHC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h3 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain