Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: circadian rhythm

Term: GO:0007623  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene131 SustainPine v2.0 2875
AutoFact: Timing of CAB expression 1 protein n=1 Tax=Castanea sativa RepID=Q56TL2_CASSA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: two-component response regulator-like aprr1-like 0.0
Putative Complete
sp_v2.0_unigene1021 SustainPine v2.0 2313
AutoFact: GTP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SRI2_RICCO 0.0
FL-Next: sp=Dynamin-like protein ARC5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: gtp binding 0.0
C-terminus
sp_v2.0_unigene1474 SustainPine v2.0 1895
AutoFact: pfam01370, Epimerase, NAD dependent epimerase/dehydratase family 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Complete
sp_v2.0_unigene1842 SustainPine v2.0 1123
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein 0.0
Internal
sp_v2.0_unigene2413 SustainPine v2.0 1594
AutoFact: GRAS family transcription factor n=1 Tax=Populus trichocarpa RepID=B9GPD0_POPTR 0.0
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Blast2go: gras family transcription factor 0.0
C-terminus
sp_v2.0_unigene3674 SustainPine v2.0 1944
AutoFact: putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transferring glycosyl 0.0
Complete
sp_v2.0_unigene4184 SustainPine v2.0 1082
AutoFact: phy rapidly regulated 2 protein [Arabidopsis thaliana] emb|CAB88302.1| putative protein [Arabidopsis thaliana] gb|AAR92241.1| At3g58850 [Arabidopsis thaliana] gb|AAS76234.1| At3g58850 [Arabidopsis thaliana] dbj|BAF01099.1| hypothetical protein [Arabidopsi 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phy rapidly regulated 2 protein 0.0
Complete
sp_v2.0_unigene4486 SustainPine v2.0 1263
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phytoclock 1 0.0
C-terminus
sp_v2.0_unigene4501 SustainPine v2.0 1343
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SEI7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase chloroplastic-like 0.0
C-terminus
sp_v2.0_unigene6793 SustainPine v2.0 1539
AutoFact: PREDICTED: similar to FIO1 (FIONA1) n=1 Tax=Vitis vinifera RepID=UPI0001982DB3 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: ribosomal rna large subunit methyltransferase f 0.0
C-terminus
sp_v2.0_unigene6998 SustainPine v2.0 548
AutoFact: large conductance calcium activated potassium channel pSlo spliceform 1-5A [Periplaneta americana] 3.0e-10
FL-Next: tr=Putative uncharacterized protein SmKC2_2; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: voltage-gated ion channel superfamily 0.0
Internal
sp_v2.0_unigene9064 SustainPine v2.0 531
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TK47_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inward rectifying potassium channel 0.0
Internal
sp_v2.0_unigene9311 SustainPine v2.0 1903
AutoFact: protein trichome birefringence-like 11 [Arabidopsis thaliana] gb|AAX23913.1| hypothetical protein At5g19160 [Arabidopsis thaliana] gb|AAZ52758.1| expressed protein [Arabidopsis thaliana] gb|AAZ52759.1| expressed protein [Arabidopsis thaliana] gb|AED92663. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein trichome birefringence-like 11 0.0
Complete
sp_v2.0_unigene10525 SustainPine v2.0 1385
AutoFact: protein plastid transcriptionally active 16 [Arabidopsis thaliana] emb|CAB51187.1| putative protein [Arabidopsis thaliana] gb|AEE78204.1| protein plastid transcriptionally active 16 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein plastid transcriptionally active 16 0.0
C-terminus
sp_v2.0_unigene11006 SustainPine v2.0 768
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 1.62324e-11
C-terminus
sp_v2.0_unigene11500 SustainPine v2.0 496
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 9.6872e-32
Internal
sp_v2.0_unigene11807 SustainPine v2.0 1030
AutoFact: transcription factor-like protein [Arabidopsis thaliana] gb|AED90905.1| transcription factor-like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=NF-X1-type zinc finger protein NFXL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nuclear transcription x-box 0.0
C-terminus
sp_v2.0_unigene11882 SustainPine v2.0 915
AutoFact: callose synthase 12 [Arabidopsis thaliana] sp|Q9ZT82.1|CALSC_ARATH RecName: Full=Callose synthase 12; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 5; AltName: Full=Protein POWDERY MILDEW RESISTANT 4 gb|AAD11597.1| put 0.0
FL-Next: sp=Callose synthase 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: callose synthase 11-like 0.0
Internal
sp_v2.0_unigene13257 SustainPine v2.0 636
AutoFact: Transferase, transferring glycosyl groups, putative n=1 Tax=Ricinus communis RepID=B9RVZ6_RICCO 0.0
FL-Next: sp=Callose synthase 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glucan synthase component 0.0
Internal
sp_v2.0_unigene13288 SustainPine v2.0 499
AutoFact: Type II CPD DNA photolyase n=1 Tax=Pityrogramma austroamericana RepID=Q6WS77_9MONI 0.0
FL-Next: Isoform 2 of Deoxyribodipyrimidine photo-lyase OS=Arabidopsis thaliana GN=PHR1 0.0
Blast2go: cpd photolyase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain