Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: circadian rhythm

Term: GO:0007623  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene80278 SustainPine v2.0 402
AutoFact: two-component response regulator-like APRR7 [Arabidopsis thaliana] sp|Q93WK5.1|APRR7_ARATH RecName: Full=Two-component response regulator-like APRR7; AltName: Full=Pseudo-response regulator 7 dbj|BAB13742.1| pseudo-response regulator 7 [Arabidopsis thalia 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sensory transduction histidine 2.42775e-27
Internal
sp_v2.0_unigene84243 SustainPine v2.0 503
AutoFact: EARLY FLOWERING 3 n=1 Tax=Brassica rapa RepID=F5B4H0_BRACM 1.0e-12
FL-Next: sp=Protein EARLY FLOWERING 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: early flowering 3 2.59222e-12
Internal
sp_v2.0_unigene86862 SustainPine v2.0 427
AutoFact: Inward rectifying potassium channel n=1 Tax=Cucumis melo RepID=Q0R4Q4_CUCME 8.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inward rectifying potassium channel 4.05312e-22
Internal
sp_v2.0_unigene90516 SustainPine v2.0 442
AutoFact: sensitivity to red light reduced protein 1 [Arabidopsis thaliana] 4.0e-06
FL-Next: sp=Protein SENSITIVITY TO RED LIGHT REDUCED 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein sensitivity to red light 9.96123e-09
C-terminus
sp_v2.0_unigene91363 SustainPine v2.0 708
AutoFact: Pseudo response regulator n=2 Tax=Populus RepID=B9N4C8_POPTR 5.99756e-43
FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
Blast2go: timing of cab expression 1 0.0
Putative Complete
sp_v2.0_unigene92314 SustainPine v2.0 329
AutoFact: transcription factor-like protein [Arabidopsis thaliana] gb|AED90905.1| transcription factor-like protein [Arabidopsis thaliana] 4.0e-07
FL-Next: sp=NF-X1-type zinc finger protein NFXL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nuclear transcription x-box 8.23358e-10
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain