Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: cytoplasmic part

Term: GO:0044444  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene18376 SustainPine v2.0 775
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ribosomal protein s15 family protein 3.47947e-20
Internal
sp_v2.0_unigene18876 SustainPine v2.0 1394
AutoFact: Protein regulator of cytokinesis, putative n=1 Tax=Ricinus communis RepID=B9RHR0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 65-kda microtubule-associated protein 3-like 0.0
C-terminus
sp_v2.0_unigene19063 SustainPine v2.0 806
AutoFact: Ribosomal protein S13, mitochondrial n=14 Tax=Magnoliophyta RepID=RT13_DAUCA 3.99931e-42
FL-Next: sp=Ribosomal protein S13, mitochondrial; Daucus carota (Carrot). Mitochondrion. 0.0
Blast2go: ribosomal protein s13 5.00264e-43
Putative Complete
sp_v2.0_unigene19075 SustainPine v2.0 361
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TI03_VITVI 2.0e-39
FL-Next: sp=DNA-directed RNA polymerase; Pinus pinaster (Maritime pine). Plastid; Chloroplast. 0.0
Blast2go: dna-directed rna polymerase i subunit rpa1-like 1.4013e-45
Internal
sp_v2.0_unigene19914 SustainPine v2.0 248
AutoFact: Gb|AAD46013.1 n=2 Tax=Arabidopsis RepID=Q9LU59_ARATH 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: protein 4.41609e-33
Internal
sp_v2.0_unigene20310 SustainPine v2.0 1467
AutoFact: GTP-binding protein SAR1A n=5 Tax=Embryophyta RepID=B4FPT6_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp-binding protein sar1a 0.0
Complete
sp_v2.0_unigene20426 SustainPine v2.0 841
AutoFact: AP-1 Golgi-related complex component; clathrin coated vesicles; clathrin assembly protein [Camptotheca acuminata] 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap-1 complex subunit sigma-1 1.74181e-30
C-terminus
sp_v2.0_unigene21112 SustainPine v2.0 2325
AutoFact: PREDICTED: similar to synaptotagmin binding, cytoplasmic RNA interacting protein, isoform 1 [Ornithorhynchus anatinus] 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein q 0.0
Complete
sp_v2.0_unigene21248 SustainPine v2.0 1058
AutoFact: Protein phosphatase 1 regulatory subunit inhibitor-3 n=1 Tax=Vicia faba RepID=C4B4E6_VICFA 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 1 regulatory subunit inhibitor-3 0.0
Complete
sp_v2.0_unigene22362 SustainPine v2.0 351
AutoFact: V-type proton ATPase 16 kDa proteolipid subunit (Fragment) n=1 Tax=Zea mays RepID=VATL_MAIZE 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: v-type proton atpase 16 kda proteolipid subunit-like isoform 2 5.08217e-10
C-terminus
sp_v2.0_unigene23008 SustainPine v2.0 2945
AutoFact: Luminal binding protein n=3 Tax=Pinaceae RepID=Q40924_PSEMZ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: luminal binding protein 0.0
Complete
sp_v2.0_unigene23153 SustainPine v2.0 1162
AutoFact: AP-4 complex subunit sigma n=7 Tax=rosids RepID=AP4S_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap-4 complex subunit sigma-1 0.0
Complete
sp_v2.0_unigene23288 SustainPine v2.0 966
AutoFact: Harpin inducing protein 1-like 9 n=1 Tax=Nicotiana tabacum RepID=Q6L7J8_TOBAC 5.0e-36
FL-Next: sp=Uncharacterized protein At1g08160; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: harpin-induced protein 2.81661e-43
Complete
sp_v2.0_unigene23355 SustainPine v2.0 744
AutoFact: Ribosomal protein L39e, putative n=1 Tax=Ricinus communis RepID=B9SC04_RICCO 7.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l39 1.1178e-29
Complete
sp_v2.0_unigene24978 SustainPine v2.0 507
AutoFact: Ribosomal protein L39e, putative n=1 Tax=Ricinus communis RepID=B9SC04_RICCO 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l39 1.08242e-30
Complete
sp_v2.0_unigene26138 SustainPine v2.0 1047
AutoFact: Protein phosphatase 1 regulatory subunit inhibitor-3 n=1 Tax=Vicia faba RepID=C4B4E6_VICFA 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 1 regulatory subunit inhibitor-3 0.0
Complete
sp_v2.0_unigene30644 SustainPine v2.0 1180
AutoFact: Ribosomal protein S4 n=1 Tax=Cycas taitungensis RepID=B0BLG9_CYCTA 0.0
FL-Next: sp=30S ribosomal protein S4, chloroplastic; Abies firma (Momi fir). Plastid; Chloroplast. 0.0
Blast2go: ribosomal protein s4 0.0
Putative Complete
sp_v2.0_unigene31051 SustainPine v2.0 885
AutoFact: Ribosomal protein S13 n=2 Tax=Cycas taitungensis RepID=B0BLG5_CYCTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein s13 0.0
Putative Complete
sp_v2.0_unigene32327 SustainPine v2.0 723
AutoFact: coatomer alpha subunit-like protein [Lotus japonicus] 9.99995e-41
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene32464 SustainPine v2.0 305
AutoFact: peroxiredoxin 6 [Ictalurus punctatus] 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxiredoxin 6 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain