Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: transcription regulator activity

Term: GO:0030528  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene3610 SustainPine v2.0 1781
AutoFact: Homeobox protein, putative n=1 Tax=Ricinus communis RepID=B9R943_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein hat5-like 0.0
Complete
sp_v2.0_unigene3628 SustainPine v2.0 2670
AutoFact: Inducer of CBF expression 1 (Fragment) n=1 Tax=Picea abies RepID=B2KZF3_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor ice1 0.0
Complete
sp_v2.0_unigene3678 SustainPine v2.0 2413
AutoFact: RecName: Full=Splicing factor U2af large subunit B; AltName: Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa subunit B; AltName: Full=U2 small nuclear ribonucleoprotein auxiliary factor large subunit B; Short=U2 snRNP auxiliary factor large subun 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene3719 SustainPine v2.0 1124
AutoFact: putative MYC transcription factor [Oryza sativa Japonica Group] 0.0
FL-Next: tr=JAMYC; Taxus cuspidata (Japanese yew). 0.0
Blast2go: transcription factor 0.0
C-terminus
sp_v2.0_unigene3932 SustainPine v2.0 1447
AutoFact: Homeobox transcription factor KN4 n=1 Tax=Picea mariana RepID=Q5SC62_PICMA 0.0
FL-Next: tr=Homeobox transcription factor KN4; Picea mariana (Black spruce) (Abies mariana). 0.0
Blast2go: homeobox transcription factor kn4 0.0
C-terminus
sp_v2.0_unigene3972 SustainPine v2.0 916
AutoFact: transcription factor bHLH76 [Arabidopsis thaliana] gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana] emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana] 3.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh76 0.0
C-terminus
sp_v2.0_unigene4246 SustainPine v2.0 644
AutoFact: WS0281.B21_D08 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS0281_D08 5, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor tt8 0.0
Putative N-terminus
sp_v2.0_unigene4408 SustainPine v2.0 925
AutoFact: transcription initiation factor TFIID subunit D4 [Arabidopsis thaliana] gb|AAR28022.1| TAF5 [Arabidopsis thaliana] gb|AED93406.1| transcription initiation factor TFIID subunit D4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transcription initiation factor tfiid subunit 5-like 0.0
N-terminus
sp_v2.0_unigene5041 SustainPine v2.0 1302
AutoFact: hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] emb|CAB16840.1| putative protein [Arabidopsis thaliana] emb|CAB80319.1| putative protein [Arabidopsis thaliana] gb|AAM65130.1| unknown [Arabidopsis thaliana] dbj|BAE99098.1| hypothetical pro 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha beta fold family protein 0.0
Complete
sp_v2.0_unigene5474 SustainPine v2.0 2203
AutoFact: HLH domain containing protein 4.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inducer of cbf expression 1 0.0
Complete
sp_v2.0_unigene5758 SustainPine v2.0 761
AutoFact: type II homeodomain-leucine zipper protein [Medicago sativa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene5879 SustainPine v2.0 1005
AutoFact: Os03g0191000 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q0DUE4_ORYSJ 4.0e-13
FL-Next: sp=Calmodulin-binding transcription activator 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: calmodulin-binding transcription activator 2 1.2504e-13
N-terminus
sp_v2.0_unigene6113 SustainPine v2.0 1321
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh149-like 0.0
Complete
sp_v2.0_unigene6126 SustainPine v2.0 1827
AutoFact: Homeobox transcription factor SKN2 n=3 Tax=Pinaceae RepID=Q9ZR90_PICMA 0.0
FL-Next: tr=Homeobox transcription factor KN2; Pinus taeda (Loblolly pine). 0.0
Blast2go: homeobox transcription factor kn2 0.0
Complete
sp_v2.0_unigene6562 SustainPine v2.0 734
AutoFact: Homeobox-leucine zipper protein HOX19 n=3 Tax=Oryza sativa RepID=HOX19_ORYSJ 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 9.41453e-23
C-terminus
sp_v2.0_unigene7187 SustainPine v2.0 2487
AutoFact: transcription factor FAMA [Arabidopsis thaliana] sp|Q56YJ8.1|FAMA_ARATH RecName: Full=Transcription factor FAMA; AltName: Full=Basic helix-loop-helix protein 97; Short=AtbHLH97; Short=bHLH 97; AltName: Full=Transcription factor EN 14; AltName: Full=bHLH t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh96-like 0.0
Complete
sp_v2.0_unigene7318 SustainPine v2.0 532
AutoFact: Homeobox-leucine zipper protein HAT14 n=2 Tax=Zea mays RepID=B6TXE8_MAIZE 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein hat14-like 0.0
C-terminus
sp_v2.0_unigene7445 SustainPine v2.0 1165
AutoFact: Unassigned protein
FL-Next: sp=Transcription factor bHLH113; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor bhlh113-like 0.0
Complete
sp_v2.0_unigene7562 SustainPine v2.0 2023
AutoFact: Helix-loop-helix DNA-binding [Medicago truncatula] 5.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytochrome-interacting factor 0.0
Complete
sp_v2.0_unigene7796 SustainPine v2.0 1672
AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hd domain class transcription factor 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain