Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: pseudouridine synthesis

Term: GO:0001522  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene999 SustainPine v2.0 1634
AutoFact: RNA pseudourine synthase 1 n=1 Tax=Arabidopsis thaliana RepID=PUS1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna pseudourine synthase 1-like 0.0
Complete
sp_v2.0_unigene1855 SustainPine v2.0 1529
AutoFact: suppressor of variegation1 causing pseudouridine synthase-like protein [Arabidopsis thaliana] gb|AAM66944.1| unknown [Arabidopsis thaliana] dbj|BAC42334.1| unknown protein [Arabidopsis thaliana] gb|AEC09639.1| suppressor of variegation1 causing pseudourid 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene3937 SustainPine v2.0 2133
AutoFact: Fruit protein PKIWI502, putative n=1 Tax=Ricinus communis RepID=B9T1V7_RICCO 0.0
FL-Next: sp=Fruit protein pKIWI502; Actinidia deliciosa (Kiwi). 0.0
Blast2go: fruit protein pkiwi502 0.0
Complete
sp_v2.0_unigene4492 SustainPine v2.0 1681
AutoFact: RNA pseudourine synthase 5 [Arabidopsis thaliana] sp|Q5M721.2|PUS5_ARATH RecName: Full=RNA pseudourine synthase 5; AltName: Full=RNA pseudouridylate synthase 5; AltName: Full=RNA-uridine isomerase 5 gb|AEE78921.1| RNA pseudourine synthase 5 [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna pseudourine synthase 5 0.0
Complete
sp_v2.0_unigene5598 SustainPine v2.0 1959
AutoFact: tRNA pseudouridine synthase family protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCD2_CUCME 0.0
FL-Next: sp=Putative tRNA pseudouridine synthase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: trna pseudouridine synthase 0.0
C-terminus
sp_v2.0_unigene6542 SustainPine v2.0 898
AutoFact: Pseudouridine synthase family protein [Arabidopsis thaliana] gb|AEE29970.1| Pseudouridine synthase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: trna pseudouridine synthase pus10-like 0.0
C-terminus
sp_v2.0_unigene7663 SustainPine v2.0 1554
AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AA47_PICSI 0.0
FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna pseudouridine synthase a-like 0.0
Putative Complete
sp_v2.0_unigene10196 SustainPine v2.0 2765
AutoFact: tRNA pseudouridine synthase d, putative n=1 Tax=Ricinus communis RepID=B9RER1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multisubstrate pseudouridine synthase 7-like 0.0
Complete
sp_v2.0_unigene12184 SustainPine v2.0 411
AutoFact: RNA pseudourine synthase 6 [Arabidopsis thaliana] sp|Q9SVS0.1|PUS6_ARATH RecName: Full=RNA pseudourine synthase 6, chloroplastic; AltName: Full=RNA pseudouridylate synthase 6; AltName: Full=RNA-uridine isomerase 6; Flags: Precursor emb|CAB36821.1| hypothe 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal pseudouridine 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain