Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: RNA binding

Term: GO:0003723  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene67924 SustainPine v2.0 337
AutoFact: cyclophilin 59 [Arabidopsis thaliana] gb|AAS75309.1| multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] gb|AEE32989.1| cyclophilin 59 [Arabidopsis thaliana] 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase-like 4-like 5.02985e-21
Putative N-terminus
sp_v2.0_unigene77261 SustainPine v2.0 369
AutoFact: cinnamoyl CoA reductase, putative [Arabidopsis thaliana] 6.0e-37
FL-Next: tr=Cinnamoyl-CoA reductase; Pinus taeda (Loblolly pine). 0.0
Blast2go: cinnamoyl- reductase 0.0
Internal
sp_v2.0_unigene80626 SustainPine v2.0 481
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RT23_RICCO 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 37 6.7157e-13
Putative N-terminus
sp_v2.0_unigene85324 SustainPine v2.0 894
AutoFact: flowering time control protein isoform OsFCA-4 [Oryza sativa Indica Group] 4.0e-11
FL-Next: Isoform Alpha of Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA 0.0
Blast2go: flowering time control protein 1.8133e-13
C-terminus
sp_v2.0_unigene86036 SustainPine v2.0 481
AutoFact: Zinc finger CCCH domain-containing protein 37 n=3 Tax=Arabidopsis RepID=C3H37_ARATH 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 37 2.2432e-19
Internal
sp_v2.0_unigene86559 SustainPine v2.0 698
AutoFact: floral homeotic protein HUA1 [Arabidopsis thaliana] 1.0e-36
FL-Next: sp=Phospholipase D; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 37 2.24208e-44
Internal
sp_v2.0_unigene91776 SustainPine v2.0 680
AutoFact: Transcription factor (Fragment) n=1 Tax=Lycoris longituba RepID=D6MKG2_9ASPA 3.0e-39
FL-Next: Isoform 2 of Cleavage and polyadenylation specificity factor CPSF30 OS=Arabidopsis thaliana GN=CPSF30 0.0
Blast2go: c-x8-c-x5-c-x3-h type zn-finger 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain