Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: pentatricopeptide repeat-containing protein chloroplastic-like

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene44360 SustainPine v2.0 298
• AutoFact: pentatricopeptide repeat protein [Zea mays] gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays] 2.0e-34
• FL-Next: sp=Pentatricopeptide repeat-containing protein At5g04810, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 1.19336e-40
Internal
sp_v2.0_unigene44881 SustainPine v2.0 628
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q0WLC6.2|PP349_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g34830, chloroplastic; Flags: Precursor gb|AEE86426.1| pentatricopeptide repeat-containing protein [Ara 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 0.0
Internal
sp_v2.0_unigene45138 SustainPine v2.0 264
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g46790, chloroplastic; AltName: Full=Protein CHLORORESPIRATORY REDUCTION 2; Flags: Precursor emb|CAB511 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 2.69373e-23
Putative C-terminus
sp_v2.0_unigene48299 SustainPine v2.0 284
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g57430, chloroplastic; Flags: Precursor gb|AEE79654.1| pentatricopeptide repeat-containing protein [Ara 7.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 2.30821e-31
Internal
sp_v2.0_unigene52465 SustainPine v2.0 167
• AutoFact: Unassigned protein
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g30610, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 2.89436e-14
Internal
sp_v2.0_unigene53367 SustainPine v2.0 356
• AutoFact: plastid transcriptionally active 2 [Arabidopsis thaliana] sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; AltName: Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor gb|AAD55291.1| 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 2.70231e-40
Internal
sp_v2.0_unigene54799 SustainPine v2.0 480
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SF38.1|PP222_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09650, chloroplastic; AltName: Full=Protein HIGH CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor gb|AAF 2.0e-12
• FL-Next: sp=Pentatricopeptide repeat-containing protein At3g09650, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 3.20413e-14
N-terminus
sp_v2.0_unigene55058 SustainPine v2.0 322
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SPW1_RICCO 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 4.94834e-12
Putative N-terminus
sp_v2.0_unigene55983 SustainPine v2.0 205
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 6.16111e-39
Internal
sp_v2.0_unigene57167 SustainPine v2.0 307
• AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 1.52049e-38
N-terminus
sp_v2.0_unigene58063 SustainPine v2.0 417
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SF38.1|PP222_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09650, chloroplastic; AltName: Full=Protein HIGH CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor gb|AAF 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 2.8333e-36
Internal
sp_v2.0_unigene58136 SustainPine v2.0 340
• AutoFact: pfam01535, PPR, PPR repeat 1.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 2.44407e-30
Internal
sp_v2.0_unigene59088 SustainPine v2.0 178
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SF38.1|PP222_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09650, chloroplastic; AltName: Full=Protein HIGH CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor gb|AAF 6.0e-12
• FL-Next: sp=Pentatricopeptide repeat-containing protein At3g09650, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 6.67045e-17
Internal
sp_v2.0_unigene64574 SustainPine v2.0 679
• AutoFact: mitochondrial editing factor 22 [Arabidopsis thaliana] sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770 dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana] gb|AEE75244.1| mitochondrial editing fa 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 0.0
Internal
sp_v2.0_unigene69611 SustainPine v2.0 399
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SF38.1|PP222_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09650, chloroplastic; AltName: Full=Protein HIGH CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor gb|AAF 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 0.0
Putative C-terminus
sp_v2.0_unigene77830 SustainPine v2.0 269
• AutoFact: Tetratricopeptide-like helical [Medicago truncatula] 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 1.42055e-26
Internal
sp_v2.0_unigene77927 SustainPine v2.0 516
• AutoFact: WS02824.CR_M07 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS02824_M07 3', mRNA sequence. 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain