Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: double-strand break repair via homologous recombination

Term: GO:0000724  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene401 SustainPine v2.0 1981
AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MYK9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily a member 3-like 2-like 0.0
Putative Complete
sp_v2.0_unigene1679 SustainPine v2.0 1055
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger swim domain-containing protein 0.0
Complete
sp_v2.0_unigene2194 SustainPine v2.0 843
AutoFact: Structural maintenance of chromosomes 6 smc6, putative n=1 Tax=Ricinus communis RepID=B9R9U6_RICCO 0.0
FL-Next: tr=Structural maintenance of chromosomes 6 smc6, putative; Ricinus communis (Castor bean). 0.0
Blast2go: structural maintenance of chromosomes protein 6-like 0.0
Internal
sp_v2.0_unigene5014 SustainPine v2.0 473
AutoFact: DNA repair helicase rad5,16, putative n=1 Tax=Ricinus communis RepID=B9SN70_RICCO 1.99993e-41
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair helicase 0.0
Internal
sp_v2.0_unigene6583 SustainPine v2.0 892
AutoFact: Unassigned protein
FL-Next: tr=Putative FAS1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: chromatin assembly factor-1 2.63156e-23
C-terminus
sp_v2.0_unigene8295 SustainPine v2.0 2804
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAA77766.1| FAS2 [Arabidopsis thaliana] dbj|BAB11430.1| FAS2 [Arabidopsis thaliana] gb|AED97930.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
Complete
sp_v2.0_unigene10144 SustainPine v2.0 1677
AutoFact: Excision repair cross-complementing 1 ercc1, putative n=1 Tax=Ricinus communis RepID=B9RF25_RICCO 0.0
FL-Next: sp=DNA excision repair protein ERCC-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna excision repair protein ercc-1 0.0
Complete
sp_v2.0_unigene11263 SustainPine v2.0 993
AutoFact: SMC-like protein [Arabidopsis thaliana] gb|AAD54770.1|AF120933_1 SMC-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: structural maintenance of chromosomes protein 6-like 0.0
C-terminus
sp_v2.0_unigene12321 SustainPine v2.0 939
AutoFact: DNA repair protein XRCC2-like protein [Arabidopsis thaliana] gb|AED97910.1| DNA repair protein XRCC2-like protein [Arabidopsis thaliana] 3.0e-37
FL-Next: sp=DNA repair protein XRCC2 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair protein xrcc2-like protein 0.0
Putative C-terminus
sp_v2.0_unigene14106 SustainPine v2.0 443
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein 4.74595e-20
Internal
sp_v2.0_unigene18670 SustainPine v2.0 609
AutoFact: putative DNA repair protein rhp54 [Oryza sativa Japonica Group] 8.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rad54-like protein 0.0
C-terminus
sp_v2.0_unigene28844 SustainPine v2.0 401
AutoFact: protein MIM [Arabidopsis thaliana] dbj|BAB10445.1| SMC-like protein [Arabidopsis thaliana] gb|AED97471.1| protein MIM [Arabidopsis thaliana] 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: structural maintenance of chromosomes protein 6-like 0.0
Internal
sp_v2.0_unigene29081 SustainPine v2.0 617
AutoFact: RecA bacterial DNA recombination protein [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair protein rad51-like protein 0.0
C-terminus
sp_v2.0_unigene32951 SustainPine v2.0 693
AutoFact: Chromatin assembly factor-1 n=6 Tax=Oryza sativa RepID=B2ZX90_ORYSJ 2.0e-19
FL-Next: tr=Putative FAS1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: chromatin assembly factor-1 1.4314e-23
Internal
sp_v2.0_unigene33152 SustainPine v2.0 621
AutoFact: rad1; RAD1 DNA repair protein homolog; K10848 DNA excision repair protein ERCC-4 [EC:3.1.-.-] 0.0
FL-Next: sp=DNA repair endonuclease UVH1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair endonuclease uvh1 0.0
C-terminus
sp_v2.0_unigene34932 SustainPine v2.0 381
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger swim domain-containing protein 0.0
Putative Complete
sp_v2.0_unigene35165 SustainPine v2.0 739
AutoFact: Cgr1 domain containing protein 4.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: chromatin assembly factor-1 3.53029e-41
Internal
sp_v2.0_unigene36726 SustainPine v2.0 530
AutoFact: crossover junction endonuclease MUS81 [Arabidopsis thaliana] dbj|BAD66696.1| endonuclease [Arabidopsis thaliana] gb|AEE85822.1| crossover junction endonuclease MUS81 [Arabidopsis thaliana] 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: crossover junction endonuclease mus81 4.67264e-40
Internal
sp_v2.0_unigene37384 SustainPine v2.0 336
AutoFact: 5' repair endonuclease [Arabidopsis thaliana] 3.00004e-41
FL-Next: sp=DNA repair endonuclease UVH1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair endonuclease uvh1 0.0
Internal
sp_v2.0_unigene37393 SustainPine v2.0 486
AutoFact: Isoform 2 of DNA repair protein XRCC2 homolog n=1 Tax=Arabidopsis thaliana RepID=Q682D3-2 1.0e-26
FL-Next: Isoform 2 of DNA repair protein XRCC2 homolog OS=Arabidopsis thaliana GN=XRCC2 0.0
Blast2go: dna repair protein xrcc2-like protein 8.33999e-34
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain