Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: double-strand break repair via homologous recombination

Term: GO:0000724  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene37584 SustainPine v2.0 455
AutoFact: DNA helicase hus2, putative n=1 Tax=Ricinus communis RepID=B9SXG0_RICCO 2.0e-22
FL-Next: sp=ATP-dependent DNA helicase Q-like 4A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna helicase 1.88456e-25
Internal
sp_v2.0_unigene37675 SustainPine v2.0 741
AutoFact: DNA/RNA helicase protein RAD5 [Arabidopsis thaliana] sp|Q9FNI6.1|SM3L2_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Short=SMARCA3-like protein 2 dbj|BAB11681.1| DNA repa 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily a member 3-like 2-like 0.0
Internal
sp_v2.0_unigene38500 SustainPine v2.0 520
AutoFact: DNA/RNA helicase protein RAD5 [Arabidopsis thaliana] sp|Q9FNI6.1|SM3L2_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Short=SMARCA3-like protein 2 dbj|BAB11681.1| DNA repa 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily a member 3-like 2-like 0.0
Internal
sp_v2.0_unigene38904 SustainPine v2.0 302
AutoFact: Protein MIM n=3 Tax=Arabidopsis RepID=Q9FII7_ARATH 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: protein mim 0.0
Internal
sp_v2.0_unigene39276 SustainPine v2.0 347
AutoFact: Ultraviolet hypersensitive 1 n=1 Tax=Arabidopsis thaliana RepID=A5JEM6_ARATH 1.0e-18
FL-Next: Isoform 2 of DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1 0.0
Blast2go: dna repair endonuclease uvh1 1.82764e-21
Internal
sp_v2.0_unigene39856 SustainPine v2.0 325
AutoFact: DNA Helicase [Arabidopsis thaliana] 3.0e-12
FL-Next: sp=ATP-dependent DNA helicase Q-like 4A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna helicase 2.01697e-18
Internal
sp_v2.0_unigene39860 SustainPine v2.0 227
AutoFact: ultraviolet hypersensitive 1 [Arabidopsis thaliana] 3.0e-10
FL-Next: Isoform 2 of DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1 0.0
Blast2go: dna repair endonuclease uvh1 8.38969e-13
Internal
sp_v2.0_unigene39975 SustainPine v2.0 480
AutoFact: OsRad54 protein n=1 Tax=Oryza sativa Japonica Group RepID=A4PBL4_ORYSJ 0.0
FL-Next: sp=ATP-dependent DNA helicase DDM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rad54-like protein 0.0
Internal
sp_v2.0_unigene43033 SustainPine v2.0 222
AutoFact: DNA repair protein radA (radA)-like [Oryza sativa Japonica Group] dbj|BAD45123.1| DNA repair protein radA (radA)-like [Oryza sativa Japonica Group] dbj|BAG91035.1| unnamed protein product [Oryza sativa Japonica Group] 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair protein rad51-like protein 4.00921e-34
Internal
sp_v2.0_unigene43575 SustainPine v2.0 399
AutoFact: Protein MIM n=3 Tax=Arabidopsis RepID=Q9FII7_ARATH 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: structural maintenance of chromosomes protein 6-like 5.70176e-27
N-terminus
sp_v2.0_unigene43922 SustainPine v2.0 284
AutoFact: DUF1767 domain containing protein 7.0e-12
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: recq-mediated genome instability protein 1-like 4.13145e-18
Internal
sp_v2.0_unigene46520 SustainPine v2.0 517
AutoFact: ultraviolet hypersensitive 1 [Arabidopsis thaliana] 0.0
FL-Next: Isoform 2 of DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1 0.0
Blast2go: dna repair endonuclease uvh1 0.0
Internal
sp_v2.0_unigene47041 SustainPine v2.0 287
AutoFact: DNA repair and recombination protein radA, putative n=1 Tax=Ricinus communis RepID=B9RDA0_RICCO 7.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair protein rad51 homolog 3-like 6.87319e-29
N-terminus
sp_v2.0_unigene47168 SustainPine v2.0 337
AutoFact: endonuclease [Arabidopsis thaliana] 6.0e-23
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: crossover junction endonuclease mus81-like 4.55121e-28
Internal
sp_v2.0_unigene47393 SustainPine v2.0 483
AutoFact: Histone chaperone n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2F4_PHYPA 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone chaperone 2.7014e-24
C-terminus
sp_v2.0_unigene50181 SustainPine v2.0 270
AutoFact: DNA Helicase [Arabidopsis thaliana] 2.0e-23
FL-Next: sp=ATP-dependent DNA helicase Q-like 4A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna helicase 3.27465e-29
Internal
sp_v2.0_unigene53560 SustainPine v2.0 266
AutoFact: 5' repair endonuclease [Arabidopsis thaliana] 4.0e-32
FL-Next: Isoform 2 of DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1 0.0
Blast2go: dna repair endonuclease uvh1 4.82607e-42
Internal
sp_v2.0_unigene54733 SustainPine v2.0 369
AutoFact: DNA Helicase [Arabidopsis thaliana] 0.0
FL-Next: sp=ATP-dependent DNA helicase Q-like 4A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna helicase 0.0
Internal
sp_v2.0_unigene55171 SustainPine v2.0 376
AutoFact: DNA Helicase [Arabidopsis thaliana] 8.0e-14
FL-Next: sp=ATP-dependent DNA helicase Q-like 4A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna helicase 8.68112e-18
Internal
sp_v2.0_unigene56256 SustainPine v2.0 518
AutoFact: endonuclease [Arabidopsis thaliana] 1.0e-15
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: crossover junction endonuclease mus81 2.78726e-19
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain