Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: response to gamma radiation

Term: GO:0010332  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene962 SustainPine v2.0 1729
AutoFact: DNA repair protein RAD51 homolog n=1 Tax=Solanum lycopersicum RepID=RAD51_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair protein rad51 homolog 0.0
Complete
sp_v2.0_unigene5471 SustainPine v2.0 1206
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9H8P5_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair and recombination protein 0.0
Complete
sp_v2.0_unigene7344 SustainPine v2.0 464
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TKE6_VITVI 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein breast cancer susceptibility 1 homolog 1.18593e-28
Putative N-terminus
sp_v2.0_unigene10144 SustainPine v2.0 1677
AutoFact: Excision repair cross-complementing 1 ercc1, putative n=1 Tax=Ricinus communis RepID=B9RF25_RICCO 0.0
FL-Next: sp=DNA excision repair protein ERCC-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna excision repair protein ercc-1 0.0
Complete
sp_v2.0_unigene11280 SustainPine v2.0 826
AutoFact: Probable G2/mitotic-specific cyclin (Fragment) n=1 Tax=Picea mariana RepID=O65064_PICMA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin b 0.0
C-terminus
sp_v2.0_unigene18670 SustainPine v2.0 609
AutoFact: putative DNA repair protein rhp54 [Oryza sativa Japonica Group] 8.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rad54-like protein 0.0
C-terminus
sp_v2.0_unigene19251 SustainPine v2.0 889
AutoFact: Ataxia telangiectasia mutated, putative n=1 Tax=Ricinus communis RepID=B9RB21_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine-protein kinase atm 0.0
Putative Complete
sp_v2.0_unigene25771 SustainPine v2.0 450
AutoFact: Unassigned protein
FL-Next: sp=Protein BREAST CANCER SUSCEPTIBILITY 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein breast cancer susceptibility 1 homolog 1.27195e-18
Internal
sp_v2.0_unigene32341 SustainPine v2.0 572
AutoFact: putative fanconi anemia, complementation group D2 [Oryza sativa Japonica Group] 6.0e-13
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: low quality protein: fanconi anemia group d2 7.68529e-18
Putative N-terminus
sp_v2.0_unigene38083 SustainPine v2.0 491
AutoFact: Transcription-coupled repair protein CSB/RAD26 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCT4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair and recombination protein 0.0
Internal
sp_v2.0_unigene38100 SustainPine v2.0 665
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9H8P5_POPTR 0.0
FL-Next: Isoform 2 of ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM 0.0
Blast2go: dna repair and recombination protein 0.0
Internal
sp_v2.0_unigene39975 SustainPine v2.0 480
AutoFact: OsRad54 protein n=1 Tax=Oryza sativa Japonica Group RepID=A4PBL4_ORYSJ 0.0
FL-Next: sp=ATP-dependent DNA helicase DDM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rad54-like protein 0.0
Internal
sp_v2.0_unigene43753 SustainPine v2.0 491
AutoFact: DNA-dependent protein kinase catalytic subunit [Gallus gallus] dbj|BAA36956.1| DNA-dependent protein kinase catalytic subunit [Gallus gallus] 2.0e-23
FL-Next: sp=Serine/threonine-protein kinase TOR; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna-dependent protein kinase catalytic subunit 0.0
Internal
sp_v2.0_unigene45040 SustainPine v2.0 408
AutoFact: Ataxia telangiectasia mutated, putative n=1 Tax=Ricinus communis RepID=B9RB21_RICCO 1.0e-20
FL-Next: sp=Serine/threonine-protein kinase ATM; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ataxia telangiectasia 2.07347e-20
Internal
sp_v2.0_unigene55585 SustainPine v2.0 558
AutoFact: RecName: Full=Serine/threonine-protein kinase ATR dbj|BAD61693.1| putative AtRAD3 [Oryza sativa Japonica Group] dbj|BAD62537.1| putative AtRAD3 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Serine/threonine-protein kinase ATR; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: serine threonine-protein kinase atr-like 0.0
C-terminus
sp_v2.0_unigene58315 SustainPine v2.0 309
AutoFact: serine/threonine-protein kinase ATR [Arabidopsis thaliana] sp|Q9FKS4.2|ATR_ARATH RecName: Full=Serine/threonine-protein kinase ATR; Short=AtATR; AltName: Full=Ataxia telangiectasia-mutated and Rad3-related homolog; AltName: Full=DNA repair protein ATR; Al 1.0e-37
FL-Next: sp=Serine/threonine-protein kinase ATR; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serine threonine-protein kinase atr-like 0.0
Internal
sp_v2.0_unigene58829 SustainPine v2.0 220
AutoFact: ataxia-telangiectasia mutated protein (Atm) [Arabidopsis thaliana] 1.0e-21
FL-Next: sp=Serine/threonine-protein kinase ATM; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serine-protein kinase atm 9.70344e-28
Internal
sp_v2.0_unigene76556 SustainPine v2.0 199
AutoFact: PREDICTED: Fanconi anemia, complementation group D2 n=1 Tax=Taeniopygia guttata RepID=UPI000194D2AA 3.0e-17
Blast2go: fanconi anemia group d2 protein 2.11479e-23
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain