Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene267 SustainPine v2.0 2597
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase g11a-like 0.0
Complete
sp_v2.0_unigene358 SustainPine v2.0 1915
AutoFact: U3 small nucleolar ribonucleoprotein protein mpp10, putative n=1 Tax=Ricinus communis RepID=B9RB06_RICCO 0.0
FL-Next: tr=U3 small nucleolar ribonucleoprotein protein mpp10, putative; Ricinus communis (Castor bean). 0.0
Blast2go: u3 small nucleolar ribonucleoprotein protein 0.0
N-terminus
sp_v2.0_unigene445 SustainPine v2.0 2562
AutoFact: CCAAT/enhancer binding protein zeta [Bos taurus] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ccaat enhancer-binding protein zeta-like 0.0
C-terminus
sp_v2.0_unigene522 SustainPine v2.0 2236
AutoFact: Actin related protein n=2 Tax=Malpighiales RepID=B9I2R4_POPTR 0.0
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Blast2go: actin-related protein 0.0
Complete
sp_v2.0_unigene604 SustainPine v2.0 1271
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein rrp5 homolog 0.0
C-terminus
sp_v2.0_unigene679 SustainPine v2.0 1926
AutoFact: N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Picea sitchensis RepID=A9NUH1_PICSI 0.0
FL-Next: sp=N-acetyl-gamma-glutamyl-phosphate reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: n-acetyl-gamma-glutamyl-phosphate reductase 0.0
Complete
sp_v2.0_unigene736 SustainPine v2.0 1990
AutoFact: putative nuclear GTPase [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: guanine nucleotide-binding 3 homolog 0.0
C-terminus
sp_v2.0_unigene966 SustainPine v2.0 2508
AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [Arabidopsis thaliana] emb|CAB82945.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAM53340.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAQ56774 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene1076 SustainPine v2.0 1911
AutoFact: Protein arginine N-methyltransferase 1 n=2 Tax=Andropogoneae RepID=B6TIG8_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arginine methyltransferease 0.0
Complete
sp_v2.0_unigene1159 SustainPine v2.0 1303
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Pumilio homolog 23 OS=Arabidopsis thaliana GN=APUM23 0.0
Blast2go: pumilio 23 0.0
Internal
sp_v2.0_unigene1430 SustainPine v2.0 1364
AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: u5 small nuclear ribonucleoprotein 200 kda helicase 0.0
Internal
sp_v2.0_unigene1447 SustainPine v2.0 1599
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAC01839.1| WD40-repeat protein [Arabidopsis thaliana] gb|AED92333.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin beta-like protein 3-like 0.0
C-terminus
sp_v2.0_unigene1468 SustainPine v2.0 1400
AutoFact: protein pumilio 24 [Arabidopsis thaliana] sp|Q9LRZ3.1|PUM24_ARATH RecName: Full=Pumilio homolog 24; Short=APUM-24; Short=AtPUM24 dbj|BAA95774.1| unnamed protein product [Arabidopsis thaliana] gb|AAK73996.1| AT3g16810/K20I9_3 [Arabidopsis thaliana] gb|AEE7 0.0
FL-Next: sp=Pumilio homolog 24; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene1509 SustainPine v2.0 1726
AutoFact: zinc finger protein 330 variant [Homo sapiens] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: zinc finger protein 330 0.0
Putative Complete
sp_v2.0_unigene1568 SustainPine v2.0 1308
AutoFact: end binding protein 1C [Arabidopsis thaliana] dbj|BAB09646.1| unnamed protein product [Arabidopsis thaliana] gb|AAM65311.1| microtubule-associated protein EB1-like protein [Arabidopsis thaliana] dbj|BAD43258.1| unknown protein [Arabidopsis thaliana] gb|AB 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene1571 SustainPine v2.0 2603
AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [Arabidopsis thaliana] emb|CAB82945.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAM53340.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAQ56774 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna-splicing factor atp-dependent rna helicase 0.0
Putative N-terminus
sp_v2.0_unigene1628 SustainPine v2.0 1918
AutoFact: Chorismate synthase n=1 Tax=Picea sitchensis RepID=B8LL06_PICSI 0.0
FL-Next: sp=Chorismate synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chorismate synthase 0.0
Complete
sp_v2.0_unigene1743 SustainPine v2.0 1583
AutoFact: autophagy regulatory protein (ISS) [Ostreococcus tauri] emb|CAL51693.1| autophagy regulatory protein (ISS) [Ostreococcus tauri] 4.0e-26
FL-Next: tr=Os06g0267600 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein autophagy 2 0.0
C-terminus
sp_v2.0_unigene1828 SustainPine v2.0 1282
AutoFact: pescadillo-like protein [Zinnia violacea] 0.0
FL-Next: sp=Pescadillo homolog; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Blast2go: pescadillo-like protein 0.0
N-terminus
sp_v2.0_unigene1892 SustainPine v2.0 1875
AutoFact: Nucleoporin interacting component; Protein prenyltransferase [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein at2g41620-like 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain