Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene11686 SustainPine v2.0 761
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 9.99995e-41
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2b like protein 0.0
C-terminus
sp_v2.0_unigene12067 SustainPine v2.0 536
AutoFact: Nuclear pore complex protein nup93, putative n=1 Tax=Ricinus communis RepID=B9S1E0_RICCO 0.0
FL-Next: sp=Uncharacterized protein At2g41620; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein at2g41620-like 0.0
Internal
sp_v2.0_unigene12075 SustainPine v2.0 741
AutoFact: Protein phosphatase, putative n=1 Tax=Ricinus communis RepID=B9T8J0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 2c 57 0.0
N-terminus
sp_v2.0_unigene12298 SustainPine v2.0 455
AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SU81_VITVI 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 26-like 0.0
Internal
sp_v2.0_unigene12671 SustainPine v2.0 1747
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase 0.0
C-terminus
sp_v2.0_unigene12778 SustainPine v2.0 634
AutoFact: Pyruvate orthophosphate dikinase regulatory protein n=1 Tax=Sorghum bicolor RepID=A9QNE5_SORBI 1.0e-36
FL-Next: Isoform 2 of Probable pyruvate, phosphate dikinase regulatory protein, chloroplastic OS=Oryza sativa subsp. japonica GN=PDRP1 0.0
Blast2go: phosphate dikinase regulatory protein 1 2.12997e-43
Internal
sp_v2.0_unigene12995 SustainPine v2.0 1965
AutoFact: embryo sac development arrest 7 protein [Arabidopsis thaliana] emb|CAB72169.1| putative protein [Arabidopsis thaliana] gb|AAL47467.1| AT3g56990/F24I3_70 [Arabidopsis thaliana] gb|AEE79596.1| embryo sac development arrest 7 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nucleolar protein 10 0.0
N-terminus
sp_v2.0_unigene13327 SustainPine v2.0 706
AutoFact: Histone H4 n=7 Tax=Neoptera RepID=E0VXR9_PEDHC 2.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene13692 SustainPine v2.0 807
AutoFact: multiple RNA-binding domain-containing protein 1 [Lodderomyces elongisporus NRRL YB-4239] gb|EDK44746.1| multiple RNA-binding domain-containing protein 1 [Lodderomyces elongisporus NRRL YB-4239] 5.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable rna-binding protein 19-like 4.2039e-45
Internal
sp_v2.0_unigene13742 SustainPine v2.0 779
AutoFact: serrate RNA effector molecule [Arabidopsis thaliana] sp|Q9ZVD0.2|SRRT_ARATH RecName: Full=Serrate RNA effector molecule gb|AAK63206.1|AF311221_1 C2H2 zinc-finger protein SERRATE [Arabidopsis thaliana] gb|AAL16137.1|AF428305_1 At2g27100/T20P8.15 [Arabidops 0.0
FL-Next: sp=Serrate RNA effector molecule; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serrate rna effector molecule-like 0.0
Internal
sp_v2.0_unigene13820 SustainPine v2.0 2069
AutoFact: putative arginine/serine-rich protein [Arabidopsis thaliana] 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein arginine serine-rich 45 0.0
Complete
sp_v2.0_unigene14008 SustainPine v2.0 453
AutoFact: F10B6.25 n=2 Tax=Arabidopsis thaliana RepID=Q9LQU6_ARATH 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nuclear pore complex protein nup155-like 4.00635e-38
Internal
sp_v2.0_unigene14035 SustainPine v2.0 2570
AutoFact: lipoamide dehydrogenase 1 [Arabidopsis thaliana] gb|AEE75888.1| lipoamide dehydrogenase 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dihydrolipoyl dehydrogenase-like 0.0
Complete
sp_v2.0_unigene14439 SustainPine v2.0 876
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
Complete
sp_v2.0_unigene14481 SustainPine v2.0 624
AutoFact: Unassigned protein
FL-Next: sp=Pumilio homolog 24; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene14578 SustainPine v2.0 2420
AutoFact: DNA helicase, TBP-interacting protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TL22_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna tbp-interacting protein 0.0
Complete
sp_v2.0_unigene14742 SustainPine v2.0 1042
AutoFact: nucleoprotein TPR [Arabidopsis thaliana] sp|A4GSN8.1|NUA_ARATH RecName: Full=Nuclear-pore anchor; AltName: Full=Protein TRANSLOCATED PROMOTER REGION; Short=AtTPR gb|ABO21684.1| nuclear-pore anchor [Arabidopsis thaliana] gb|AEE36226.1| nucleoprotein TPR [A 0.0
FL-Next: sp=Nuclear-pore anchor; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nucleoprotein tpr 0.0
Internal
sp_v2.0_unigene14776 SustainPine v2.0 189
AutoFact: NUC153 domain containing protein 9.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nucleolar protein 10 2.11524e-11
Internal
sp_v2.0_unigene14833 SustainPine v2.0 1082
AutoFact: Interferon-induced guanylate-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RB86_RICCO 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: interferon-induced guanylate-binding 2.18682e-28
Putative N-terminus
sp_v2.0_unigene14951 SustainPine v2.0 992
AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin fusion protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain