Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene8806 SustainPine v2.0 1845
AutoFact: Rrp15p multi-domain protein 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Complete
sp_v2.0_unigene8941 SustainPine v2.0 590
AutoFact: protein phosphatase 2C 57 [Arabidopsis thaliana] sp|P49599.2|P2C57_ARATH RecName: Full=Protein phosphatase 2C 57; Short=AtPP2C57; AltName: Full=Protein phosphatase 2C PPH1; Short=PP2C PPH1 emb|CAB81429.1| protein phosphatase homolog (PPH1) [Arabidopsis th 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 2c 57 0.0
C-terminus
sp_v2.0_unigene9029 SustainPine v2.0 1371
AutoFact: Prohibitin n=4 Tax=core eudicotyledons RepID=O04361_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: prohibitin 0.0
Complete
sp_v2.0_unigene9064 SustainPine v2.0 531
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TK47_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inward rectifying potassium channel 0.0
Internal
sp_v2.0_unigene9084 SustainPine v2.0 1780
AutoFact: homolog of nucleolar protein NOP56 [Arabidopsis thaliana] gb|AAF02835.1|AC009894_6 nucleolar protein [Arabidopsis thaliana] gb|AAG40838.1|AF302492_1 NOP56-like protein [Arabidopsis thaliana] gb|AAK62596.1| At1g56110/T6H22_9 [Arabidopsis thaliana] gb|AAM26 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleolar protein 0.0
Complete
sp_v2.0_unigene9155 SustainPine v2.0 1958
AutoFact: ribosomal protein L1p/L10e family protein [Arabidopsis thaliana] emb|CAB88283.1| putative protein [Arabidopsis thaliana] gb|AAL49900.1| unknown protein [Arabidopsis thaliana] gb|AEE79812.1| ribosomal protein L1p/L10e family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene9236 SustainPine v2.0 851
AutoFact: nucleoprotein TPR [Arabidopsis thaliana] sp|A4GSN8.1|NUA_ARATH RecName: Full=Nuclear-pore anchor; AltName: Full=Protein TRANSLOCATED PROMOTER REGION; Short=AtTPR gb|ABO21684.1| nuclear-pore anchor [Arabidopsis thaliana] gb|AEE36226.1| nucleoprotein TPR [A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleoprotein tpr 0.0
Complete
sp_v2.0_unigene9425 SustainPine v2.0 724
AutoFact: Actin-75 n=1 Tax=Solanum tuberosum RepID=ACT7_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene9429 SustainPine v2.0 1673
AutoFact: RNA polymerase, dimerisation [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase third largest subunit 0.0
Complete
sp_v2.0_unigene9853 SustainPine v2.0 2128
AutoFact: Herpes_gp2 multi-domain protein 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene10122 SustainPine v2.0 1829
AutoFact: uncharacterized protein [Arabidopsis thaliana] gb|AAF27096.1|AC011809_5 Unknown protein [Arabidopsis thaliana] gb|AAL07061.1| unknown protein [Arabidopsis thaliana] gb|AAM20279.1| unknown protein [Arabidopsis thaliana] gb|AEE29771.1| uncharacterized prote 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: uncharacterized protein 0.0
Putative Complete
sp_v2.0_unigene10125 SustainPine v2.0 2171
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_974317.1| RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAA97064.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36202.1| putative RNA-binding protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
Complete
sp_v2.0_unigene10447 SustainPine v2.0 1139
AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ricinus communis RepID=B9S2Y0_RICCO 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 26; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 26-like 0.0
N-terminus
sp_v2.0_unigene10456 SustainPine v2.0 2884
AutoFact: DUF1253 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: digestive organ expansion factor-like protein 0.0
Complete
sp_v2.0_unigene10499 SustainPine v2.0 1755
AutoFact: serine/threonine-protein kinase aurora-1 [Arabidopsis thaliana] sp|Q9M077.1|AUR1_ARATH RecName: Full=Serine/threonine-protein kinase Aurora-1; Short=AtAur1; AltName: Full=Aurora-like kinase 1 emb|CAB80000.1| putative serine/threonine protein kinase [Arabi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase aurora-1 0.0
Complete
sp_v2.0_unigene10848 SustainPine v2.0 849
AutoFact: PREDICTED: histone deacetylase 6-like isoform 8 [Macaca mulatta] 5.0e-22
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: histone deacetylase 0.0
Putative Complete
sp_v2.0_unigene10911 SustainPine v2.0 574
AutoFact: elongation factor like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u5 small nuclear ribonucleoprotein component 0.0
Putative C-terminus
sp_v2.0_unigene11127 SustainPine v2.0 839
AutoFact: BRI1-KD interacting protein 132 [Oryza sativa Japonica Group] 3.0e-33
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: nucleolar and coiled-body phosphoprotein 7.79612e-41
C-terminus
sp_v2.0_unigene11128 SustainPine v2.0 911
AutoFact: pfam10243, MIP-T3, Microtubule-binding protein MIP-T3 4.0e-05
FL-Next: sp=Pumilio homolog 24; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 1.71025e-33
N-terminus
sp_v2.0_unigene11500 SustainPine v2.0 496
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 9.6872e-32
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain