Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene81685 SustainPine v2.0 648
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at3g52930-like protein 0.0
N-terminus
sp_v2.0_unigene81699 SustainPine v2.0 523
AutoFact: 60S ribosomal protein L3-1 n=7 Tax=Brassicaceae RepID=RL31_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l3-1 0.0
Internal
sp_v2.0_unigene81712 SustainPine v2.0 787
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fructose-bisphosphate aldolase 0.0
C-terminus
sp_v2.0_unigene81729 SustainPine v2.0 361
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 2.0e-37
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fructose-bisphosphate class i 3.97343e-37
Internal
sp_v2.0_unigene81745 SustainPine v2.0 759
AutoFact: 26S proteasome regulatory complex, ATPase RPT4 n=4 Tax=Embryophyta RepID=A9RK27_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v2.0_unigene81799 SustainPine v2.0 484
AutoFact: 60S ribosomal protein L4 n=1 Tax=Prunus armeniaca RepID=RL4_PRUAR 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal 0.0
Putative N-terminus
sp_v2.0_unigene81857 SustainPine v2.0 1066
AutoFact: 26S protease regulatory subunit 10B homolog A n=2 Tax=Arabidopsis RepID=PS10A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 26s protease regulatory subunit 0.0
N-terminus
sp_v2.0_unigene82142 SustainPine v2.0 558
AutoFact: beta-tubulin [Eucalyptus grandis] 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubulin beta-2 beta-3 chain 0.0
Putative Complete
sp_v2.0_unigene82244 SustainPine v2.0 806
AutoFact: Heat shock 70kDa protein 1/8 n=5 Tax=rosids RepID=F4KCE5_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock 70kda protein 1 8 0.0
C-terminus
sp_v2.0_unigene82257 SustainPine v2.0 451
AutoFact: histone H4 [Hyacinthus orientalis] 9.0e-39
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene82298 SustainPine v2.0 1148
AutoFact: Heat shock 70kDa protein 1/8 n=5 Tax=rosids RepID=F4KCE5_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock 70kda protein 1 8 0.0
C-terminus
sp_v2.0_unigene82385 SustainPine v2.0 442
AutoFact: PREDICTED: similar to HSC70-1 (heat shock cognate 70 kDa protein 1); ATP binding isoform 1 [Vitis vinifera] emb|CAN81694.1| hypothetical protein VITISV_017873 [Vitis vinifera] 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock 70kda protein 1 8 3.33313e-29
N-terminus
sp_v2.0_unigene82404 SustainPine v2.0 483
AutoFact: histone H4 [Hyacinthus orientalis] 1.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene82451 SustainPine v2.0 543
AutoFact: S-adenosylmethionine synthase 1 n=12 Tax=Spermatophyta RepID=METK1_HORVU 0.0
FL-Next: sp=S-adenosylmethionine synthase 2; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Blast2go: s-adenosyl methionine synthetase 0.0
Internal
sp_v2.0_unigene82459 SustainPine v2.0 635
AutoFact: 40S ribosomal protein S4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s4 0.0
C-terminus
sp_v2.0_unigene82598 SustainPine v2.0 712
AutoFact: S-adenosylmethionine synthetase (Fragment) n=1 Tax=Dendrobium hybrid cultivar RepID=A4GKJ0_9ASPA 0.0
FL-Next: sp=S-adenosylmethionine synthase 2; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Blast2go: s-adenosylmethionine synthetase 0.0
Putative N-terminus
sp_v2.0_unigene82716 SustainPine v2.0 744
AutoFact: Heat shock cognate 70 kDa protein n=7 Tax=Magnoliophyta RepID=HSP7C_PETHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock 0.0
N-terminus
sp_v2.0_unigene82768 SustainPine v2.0 455
AutoFact: HSP70 (Fragment) n=1 Tax=Populus alba RepID=Q8GUW2_POPAL 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock protein 70 0.0
Internal
sp_v2.0_unigene83158 SustainPine v2.0 383
AutoFact: 60S ribosomal protein L21 n=9 Tax=Poaceae RepID=Q9AV87_ORYSJ 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l21 1.77991e-34
N-terminus
sp_v2.0_unigene83601 SustainPine v2.0 443
AutoFact: 60S ribosomal protein L27a-3 [Arabidopsis thaliana] ref|XP_002888788.1| 60S ribosomal protein L27A [Arabidopsis lyrata subsp. lyrata] sp|P49637.2|R27A3_ARATH RecName: Full=60S ribosomal protein L27a-3 gb|AAG52338.1|AC011663_17 60S ribosomal protein L27A; 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l27a 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain