Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: chloroplast thylakoid lumen

Term: GO:0009543  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene28599 SustainPine v2.0 1393
AutoFact: thylakoid lumenal protein [Arabidopsis thaliana] sp|Q9SW33.1|TL1Y_ARATH RecName: Full=Thylakoid lumenal 17.9 kDa protein, chloroplastic; Flags: Precursor emb|CAB36735.1| hypothetical protein [Arabidopsis thaliana] emb|CAB79402.1| hypothetical protein [Ara 2.99878e-43
FL-Next: sp=Thylakoid lumenal 17.9 kDa protein, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene30464 SustainPine v2.0 880
AutoFact: immunophilin/FKBP-type peptidyl-prolyl cis-trans isomerase-like protein [Oryza sativa Japonica Group] dbj|BAD30608.1| immunophilin/FKBP-type peptidyl-prolyl cis-trans isomerase-like protein [Oryza sativa Japonica Group] gb|EAZ02679.1| hypothetical protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene30480 SustainPine v2.0 784
AutoFact: Protease Do-like 1, chloroplastic n=2 Tax=Arabidopsis RepID=DEGP1_ARATH 0.0
FL-Next: sp=Protease Do-like 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serine-type peptidase 0.0
C-terminus
sp_v2.0_unigene33488 SustainPine v2.0 685
AutoFact: thylakoid lumenal protein 2 [Arabidopsis thaliana] sp|Q9LVV5.2|TL15B_ARATH RecName: Full=Thylakoid lumenal 15.0 kDa protein 2, chloroplastic; Flags: Precursor gb|AAK82479.1| AT5g52970/MNB8_3 [Arabidopsis thaliana] gb|AAM10309.1| AT5g52970/MNB8_3 [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: permeases of the major facilitator superfamily 0.0
C-terminus
sp_v2.0_unigene36690 SustainPine v2.0 656
AutoFact: Os08g0382400 protein n=3 Tax=Oryza sativa RepID=Q6YW78_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v2.0_unigene43812 SustainPine v2.0 227
AutoFact: Protease Do-like 1, chloroplastic n=2 Tax=Arabidopsis RepID=DEGP1_ARATH 3.0e-27
FL-Next: sp=Protease Do-like 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: degp1 8.66475e-35
Internal
sp_v2.0_unigene63046 SustainPine v2.0 460
AutoFact: D1 protease-like protein precursor [Nicotiana plumbaginifolia] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: carboxyl-terminal-processing protease 3.49374e-25
Internal
sp_v2.0_unigene67637 SustainPine v2.0 294
AutoFact: thylakoid lumenal protein [Arabidopsis thaliana] sp|Q9SW33.1|TL1Y_ARATH RecName: Full=Thylakoid lumenal 17.9 kDa protein, chloroplastic; Flags: Precursor emb|CAB36735.1| hypothetical protein [Arabidopsis thaliana] emb|CAB79402.1| hypothetical protein [Ara 3.0e-06
FL-Next: sp=Thylakoid lumenal 17.9 kDa protein, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: thylakoid lumenal kda protein 2.35607e-14
Internal
sp_v2.0_unigene75212 SustainPine v2.0 398
AutoFact: putative FKBP-type peptidyl-prolyl cis-trans isomerase 7 [Arabidopsis thaliana] sp|Q9LYR5.1|FKBP7_ARATH RecName: Full=Probable FKBP-type peptidyl-prolyl cis-trans isomerase 7, chloroplastic; Short=PPIase; AltName: Full=Rotamase; Flags: Precursor emb|CAB87 1.4013e-45
FL-Next: sp=Probable FKBP-type peptidyl-prolyl cis-trans isomerase 7, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene77986 SustainPine v2.0 323
AutoFact: Thylakoid lumenal 16.5 kDa protein, chloroplastic n=2 Tax=Arabidopsis RepID=TL16_ARATH 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chloroplast thylakoid lumen protein 1.36348e-15
C-terminus
sp_v2.0_unigene81591 SustainPine v2.0 501
AutoFact: Chloroplast oxygen-evolving enhancer protein n=1 Tax=Manihot esculenta RepID=Q5PYQ5_MANES 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: photosystem ii oxygen-evolving complex protein 3-like 0.0
Internal
sp_v2.0_unigene82986 SustainPine v2.0 969
AutoFact: Oxygen-evolving enhancer protein 3-1, chloroplastic n=3 Tax=Arabidopsis RepID=PSBQ1_ARATH 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: oxygen-evolving enhancer protein 3-1 3.12623e-37
Putative C-terminus
sp_v2.0_unigene85635 SustainPine v2.0 854
AutoFact: photosystem II stability/assembly factor HCF136 [Arabidopsis thaliana] sp|O82660.1|P2SAF_ARATH RecName: Full=Photosystem II stability/assembly factor HCF136, chloroplastic; Flags: Precursor emb|CAA75723.1| HCF136 protein [Arabidopsis thaliana] dbj|BAB0982 0.0
FL-Next: sp=Photosystem II stability/assembly factor HCF136, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: photosystem ii stability assembly factor hcf136 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain