Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: auxin mediated signaling pathway

Term: GO:0009734  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene101 SustainPine v2.0 2266
AutoFact: amyloid beta precursor protein binding protein 1 [Arabidopsis thaliana] sp|P42744.1|ULA1_ARATH RecName: Full=NEDD8-activating enzyme E1 regulatory subunit; AltName: Full=Auxin-resistance protein AXR1 gb|AAB59348.1| ubiquitin-activating enzyme E1 [Arabidop 0.0
FL-Next: sp=NEDD8-activating enzyme E1 regulatory subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nedd8-activating enzyme e1 regulatory subunit 0.0
Complete
sp_v2.0_unigene425 SustainPine v2.0 3000
AutoFact: TIR1/AFB auxin receptor protein PintaAFB6 n=1 Tax=Pinus taeda RepID=C9EHT0_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB6; Pinus taeda (Loblolly pine). 0.0
Blast2go: transport inhibitor response 1 0.0
Complete
sp_v2.0_unigene605 SustainPine v2.0 1809
AutoFact: Molybdopterin biosynthesis protein, putative n=1 Tax=Ricinus communis RepID=B9RQ35_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: molybdopterin biosynthesis protein cnx1-like 0.0
C-terminus
sp_v2.0_unigene621 SustainPine v2.0 1415
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ephedra distachya RepID=E1UHX6_EPHDI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arf6 0.0
C-terminus
sp_v2.0_unigene1128 SustainPine v2.0 2583
AutoFact: TIR1/AFB auxin receptor protein PintaTIR1 n=1 Tax=Pinus taeda RepID=C9EHS7_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaTIR1; Pinus taeda (Loblolly pine). 0.0
Blast2go: transport inhibitor response 1 0.0
Complete
sp_v2.0_unigene2144 SustainPine v2.0 1768
AutoFact: Auxin-induced protein 5NG4 n=1 Tax=Pinus taeda RepID=5NG4_PINTA 0.0
FL-Next: sp=Auxin-induced protein 5NG4; Pinus taeda (Loblolly pine). 0.0
Blast2go: auxin-induced protein 5ng4-like 0.0
Complete
sp_v2.0_unigene2238 SustainPine v2.0 682
AutoFact: Auxin responsive GH3-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZF61_PICSI 0.0
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin responsive gh3-like protein 0.0
C-terminus
sp_v2.0_unigene2646 SustainPine v2.0 1491
AutoFact: N-acetyltransferase, putative n=1 Tax=Ricinus communis RepID=B9SGZ0_RICCO 0.0
FL-Next: tr=N-acetyltransferase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: probable n-acetyltransferase hookless 1 0.0
Complete
sp_v2.0_unigene2682 SustainPine v2.0 809
AutoFact: Molybdopterin biosynthesis protein, putative n=1 Tax=Ricinus communis RepID=B9RQ35_RICCO 2.94273e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: molybdopterin biosynthesis protein cnx1-like 0.0
N-terminus
sp_v2.0_unigene3630 SustainPine v2.0 3272
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
Blast2go: f-box family protein 0.0
Complete
sp_v2.0_unigene3826 SustainPine v2.0 1613
AutoFact: DUF298 domain containing protein 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene4093 SustainPine v2.0 1651
AutoFact: auxin response factor 6 [Arabidopsis thaliana] sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6 gb|AAT67072.1| ARF6 [Arabidopsis thaliana] gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 6-like 0.0
Internal
sp_v2.0_unigene6244 SustainPine v2.0 796
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
Blast2go: f-box family protein 0.0
N-terminus
sp_v2.0_unigene6867 SustainPine v2.0 1970
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
Blast2go: f-box family protein 0.0
C-terminus
sp_v2.0_unigene7026 SustainPine v2.0 728
AutoFact: Homeobox-leucine zipper protein HAT2 n=3 Tax=Brassicaceae RepID=HAT2_ARATH 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein hat1 2.1949e-37
N-terminus
sp_v2.0_unigene7551 SustainPine v2.0 989
AutoFact: Putative auxin-binding protein 1 n=1 Tax=Boehmeria nivea RepID=A8W7I6_BOENI 0.0
FL-Next: sp=Auxin-binding protein T85; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: auxin-binding protein 1 0.0
Complete
sp_v2.0_unigene7658 SustainPine v2.0 1333
AutoFact: Auxin-induced protein 2 n=2 Tax=Pinus RepID=Q7XYT5_PINTA 0.0
FL-Next: tr=Putative auxin induced transcription factor Aux/IAA; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin-responsive protein 0.0
Complete
sp_v2.0_unigene7745 SustainPine v2.0 2377
AutoFact: Auxin transporter-like protein 4 n=1 Tax=Medicago truncatula RepID=LAX4_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin influx carrier protein 0.0
Complete
sp_v2.0_unigene9205 SustainPine v2.0 1037
AutoFact: Auxin response factor n=1 Tax=Physcomitrella patens RepID=D2NUD7_9BRYO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 10 0.0
Internal
sp_v2.0_unigene9672 SustainPine v2.0 960
AutoFact: auxin-responsive protein IAA13 [Arabidopsis thaliana] ref|NP_001118434.1| auxin-responsive protein IAA13 [Arabidopsis thaliana] gb|AAG48763.1|AF332399_1 auxin-regulated protein IAA13 [Arabidopsis thaliana] gb|AAC49054.1| IAA13 [Arabidopsis thaliana] gb|AA 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin-responsive protein iaa13 6.91375e-17
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain