Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: cytoplasm

Term: GO:0005737  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene5823 SustainPine v2.0 1457
AutoFact: Alpha-bisabolene synthase n=1 Tax=Abies grandis RepID=TPSD1_ABIGR 0.0
FL-Next: sp=Alpha-bisabolene synthase; Abies grandis (Grand fir). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
C-terminus
sp_v2.0_unigene5874 SustainPine v2.0 1281
AutoFact: D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=Arabidopsis RepID=Q8VZ75_ARATH 0.0
FL-Next: sp=D-tyrosyl-tRNA(Tyr) deacylase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: d-tyrosyl-trna deacylase 0.0
Complete
sp_v2.0_unigene5906 SustainPine v2.0 3213
AutoFact: leucyl-tRNA synthetase [Arabidopsis thaliana] gb|AEE28469.1| leucyl-tRNA synthetase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene5930 SustainPine v2.0 1649
AutoFact: Nicotinate phosphoribosyltransferase, putative n=1 Tax=Ricinus communis RepID=B9SC93_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nicotinate phosphoribosyltransferase-like protein 0.0
C-terminus
sp_v2.0_unigene5958 SustainPine v2.0 1168
AutoFact: chaperone binding / ATPase activator [Arabidopsis thaliana] gb|AAL58914.1|AF462824_1 AT5g58110/k21l19_90 [Arabidopsis thaliana] dbj|BAB11003.1| unnamed protein product [Arabidopsis thaliana] gb|AAM19978.1| AT5g58110/k21l19_90 [Arabidopsis thaliana] gb|AED 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone binding atpase activator 0.0
Complete
sp_v2.0_unigene5963 SustainPine v2.0 2133
AutoFact: Trehalose-6-phosphate synthase, putative n=1 Tax=Ricinus communis RepID=B9SZ18_RICCO 0.0
FL-Next: sp=Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: trehalose-6-phosphate synthase 0.0
C-terminus
sp_v2.0_unigene5977 SustainPine v2.0 1761
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gb|AAL32805.1| putative protein [Arabidopsis thaliana] gb|AAR23706.1| At4g27640 [Arabidopsis thaliana] gb|AEE85373.1| armadillo/beta-catenin-like repeat-containing protein [Arabi 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: probable importin subunit beta-4-like 0.0
C-terminus
sp_v2.0_unigene5988 SustainPine v2.0 1332
AutoFact: RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleoside-diphosphate reductase R2 subunit; AltName: Full=Ribonucleotide reductase small subunit emb|CAA63194.1| ribonucleotide reductase R2 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribonucleotide reductase small subunit 0.0
Complete
sp_v2.0_unigene6011 SustainPine v2.0 1822
AutoFact: Kelch repeat containing protein n=3 Tax=Oryza sativa RepID=Q6ZXK6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nitrile-specifier protein 5-like 0.0
Complete
sp_v2.0_unigene6071 SustainPine v2.0 556
AutoFact: Fkbp-rapamycin associated protein, putative n=1 Tax=Ricinus communis RepID=B9RWX6_RICCO 0.0
FL-Next: sp=Serine/threonine-protein kinase TOR; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: fkbp12-rapamycin complex-associated protein 0.0
Internal
sp_v2.0_unigene6080 SustainPine v2.0 1091
AutoFact: RHO guanyl-nucleotide exchange factor 11 [Arabidopsis thaliana] gb|AAF29412.1|AC022354_11 dynein light chain, putative [Arabidopsis thaliana] gb|AAG51538.1|AC037424_3 unknown protein; 73838-74229 [Arabidopsis thaliana] gb|AAR20740.1| At1g52250 [Arabidopsi 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytoplasmic dynein light 0.0
Complete
sp_v2.0_unigene6114 SustainPine v2.0 1428
AutoFact: Glutamine synthetase cytosolic isozyme n=2 Tax=Pinaceae RepID=GLNA_PINSY 0.0
FL-Next: sp=Glutamine synthetase cytosolic isozyme; Pinus sylvestris (Scots pine). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene6217 SustainPine v2.0 288
AutoFact: E-alpha-bisabolene synthase n=1 Tax=Picea abies RepID=Q675L6_PICAB 1.0e-20
FL-Next: tr=(E)-beta-farnesene synthase 2; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 2.61435e-21
Internal
sp_v2.0_unigene6260 SustainPine v2.0 476
AutoFact: Aberrant root formation protein 4 n=3 Tax=Arabidopsis thaliana RepID=ALF4_ARATH 4.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aberrant root formation protein 4-like 0.0
Internal
sp_v2.0_unigene6299 SustainPine v2.0 3581
AutoFact: arabinose kinase [Arabidopsis thaliana] sp|O23461.1|ARAK_ARATH RecName: Full=L-arabinokinase; Short=AtISA1 emb|CAB10392.1| galactokinase like protein [Arabidopsis thaliana] emb|CAB78655.1| galactokinase like protein [Arabidopsis thaliana] gb|AEE83696.1| a 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: galactokinase like protein 0.0
Complete
sp_v2.0_unigene6328 SustainPine v2.0 1129
AutoFact: partner of Y14-mago [Arabidopsis thaliana] ref|NP_849639.1| partner of Y14-mago [Arabidopsis thaliana] ref|NP_001031023.1| partner of Y14-mago [Arabidopsis thaliana] gb|AAF16626.1|AC011661_4 T23J18.7 [Arabidopsis thaliana] gb|AAO42233.1| unknown protein [ 9.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: partner of y14-mago 0.0
Complete
sp_v2.0_unigene6388 SustainPine v2.0 1834
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta chain 0.0
Complete
sp_v2.0_unigene6408 SustainPine v2.0 2083
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S3Y1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding 0.0
Complete
sp_v2.0_unigene6477 SustainPine v2.0 777
AutoFact: Superoxide dismutase [Cu-Zn] n=2 Tax=Pinus sylvestris RepID=Q9AR80_PINSY 0.0
FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
Blast2go: superoxide dismutase 2 0.0
Complete
sp_v2.0_unigene6494 SustainPine v2.0 2994
AutoFact: contains similarity to human PCF11p homolog (GB:AF046935) [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain